Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFRSF1BP20333 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TNFRSF1BP20333 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFRSF1BP20333 AC073439.1-201ENST00000624121 1774 ntBASIC14.98□□□□□ -0.01
TNFRSF1BP20333 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.98□□□□□ -0.01
TNFRSF1BP20333 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TNFRSF1BP20333 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFRSF1BP20333 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TNFRSF1BP20333 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TNFRSF1BP20333 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.98□□□□□ -0.01
TNFRSF1BP20333 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.98□□□□□ -0.01
TNFRSF1BP20333 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.98□□□□□ -0.01
TNFRSF1BP20333 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFRSF1BP20333 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
TNFRSF1BP20333 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFRSF1BP20333 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TNFRSF1BP20333 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TNFRSF1BP20333 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFRSF1BP20333 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
TNFRSF1BP20333 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFRSF1BP20333 AL109954.1-202ENST00000564051 2148 ntBASIC14.98□□□□□ -0.01
TNFRSF1BP20333 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFRSF1BP20333 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFRSF1BP20333 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFRSF1BP20333 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.98□□□□□ -0.01
TNFRSF1BP20333 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFRSF1BP20333 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFRSF1BP20333 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFRSF1BP20333 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TNFRSF1BP20333 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TNFRSF1BP20333 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFRSF1BP20333 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFRSF1BP20333 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TNFRSF1BP20333 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFRSF1BP20333 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFRSF1BP20333 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFRSF1BP20333 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC14.98□□□□□ -0.01
TNFRSF1BP20333 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
TNFRSF1BP20333 KRT18P34-201ENST00000488218 1270 ntBASIC14.98□□□□□ -0.01
TNFRSF1BP20333 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.98□□□□□ -0.01
TNFRSF1BP20333 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.98□□□□□ -0.01
TNFRSF1BP20333 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.98□□□□□ -0.01
TNFRSF1BP20333 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
TNFRSF1BP20333 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.98□□□□□ -0.01
TNFRSF1BP20333 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFRSF1BP20333 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
TNFRSF1BP20333 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.98□□□□□ -0.01
TNFRSF1BP20333 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.98□□□□□ -0.01
TNFRSF1BP20333 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.98□□□□□ -0.01
TNFRSF1BP20333 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.98□□□□□ -0.01
TNFRSF1BP20333 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
TNFRSF1BP20333 AL773604.1-201ENST00000617417 272 ntBASIC14.98□□□□□ -0.01
TNFRSF1BP20333 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFRSF1BP20333 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TNFRSF1BP20333 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFRSF1BP20333 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFRSF1BP20333 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFRSF1BP20333 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TNFRSF1BP20333 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFRSF1BP20333 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFRSF1BP20333 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.98□□□□□ -0.01
TNFRSF1BP20333 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFRSF1BP20333 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.98□□□□□ -0.01
TNFRSF1BP20333 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TNFRSF1BP20333 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TNFRSF1BP20333 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.98□□□□□ -0.01
TNFRSF1BP20333 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TNFRSF1BP20333 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.98□□□□□ -0.01
TNFRSF1BP20333 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.97□□□□□ -0.01
TNFRSF1BP20333 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.97□□□□□ -0.01
TNFRSF1BP20333 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TNFRSF1BP20333 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TNFRSF1BP20333 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
TNFRSF1BP20333 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TNFRSF1BP20333 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
TNFRSF1BP20333 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
TNFRSF1BP20333 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC14.97□□□□□ -0.01
TNFRSF1BP20333 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TNFRSF1BP20333 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TNFRSF1BP20333 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TNFRSF1BP20333 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TNFRSF1BP20333 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TNFRSF1BP20333 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
TNFRSF1BP20333 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TNFRSF1BP20333 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
TNFRSF1BP20333 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TNFRSF1BP20333 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.97□□□□□ -0.01
TNFRSF1BP20333 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TNFRSF1BP20333 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TNFRSF1BP20333 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.97□□□□□ -0.01
TNFRSF1BP20333 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TNFRSF1BP20333 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.97□□□□□ -0.01
TNFRSF1BP20333 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.97□□□□□ -0.01
TNFRSF1BP20333 RN7SL510P-201ENST00000581311 263 ntBASIC14.97□□□□□ -0.01
TNFRSF1BP20333 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.97□□□□□ -0.01
TNFRSF1BP20333 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.97□□□□□ -0.01
TNFRSF1BP20333 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TNFRSF1BP20333 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
TNFRSF1BP20333 AC009090.5-201ENST00000624886 2285 ntBASIC14.97□□□□□ -0.01
TNFRSF1BP20333 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms