Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
XRCC1P18887 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
XRCC1P18887 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
XRCC1P18887 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
XRCC1P18887 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
XRCC1P18887 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.1■□□□□ 0.17
XRCC1P18887 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
XRCC1P18887 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
XRCC1P18887 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
XRCC1P18887 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
XRCC1P18887 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
XRCC1P18887 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
XRCC1P18887 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.09■□□□□ 0.17
XRCC1P18887 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
XRCC1P18887 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
XRCC1P18887 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.09■□□□□ 0.17
XRCC1P18887 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
XRCC1P18887 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
XRCC1P18887 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
XRCC1P18887 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
XRCC1P18887 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.09■□□□□ 0.17
XRCC1P18887 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
XRCC1P18887 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
XRCC1P18887 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
XRCC1P18887 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
XRCC1P18887 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
XRCC1P18887 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.09■□□□□ 0.17
XRCC1P18887 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.09■□□□□ 0.17
XRCC1P18887 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
XRCC1P18887 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
XRCC1P18887 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.09■□□□□ 0.17
XRCC1P18887 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
XRCC1P18887 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.09■□□□□ 0.17
XRCC1P18887 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.09■□□□□ 0.17
XRCC1P18887 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.09■□□□□ 0.17
XRCC1P18887 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.09■□□□□ 0.17
XRCC1P18887 AC069262.1-201ENST00000539058 672 ntBASIC16.09■□□□□ 0.17
XRCC1P18887 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
XRCC1P18887 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.09■□□□□ 0.17
XRCC1P18887 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
XRCC1P18887 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.09■□□□□ 0.17
XRCC1P18887 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.09■□□□□ 0.17
XRCC1P18887 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.09■□□□□ 0.17
XRCC1P18887 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.09■□□□□ 0.17
XRCC1P18887 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.09■□□□□ 0.17
XRCC1P18887 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.09■□□□□ 0.17
XRCC1P18887 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.09■□□□□ 0.17
XRCC1P18887 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
XRCC1P18887 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
XRCC1P18887 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.09■□□□□ 0.17
XRCC1P18887 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.09■□□□□ 0.17
XRCC1P18887 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
XRCC1P18887 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.09■□□□□ 0.17
XRCC1P18887 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
XRCC1P18887 AP002414.2-201ENST00000591780 3365 ntBASIC16.09■□□□□ 0.17
XRCC1P18887 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
XRCC1P18887 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.08■□□□□ 0.17
XRCC1P18887 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
XRCC1P18887 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
XRCC1P18887 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
XRCC1P18887 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.08■□□□□ 0.17
XRCC1P18887 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
XRCC1P18887 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
XRCC1P18887 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.08■□□□□ 0.17
XRCC1P18887 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
XRCC1P18887 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.08■□□□□ 0.16
XRCC1P18887 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.08■□□□□ 0.16
XRCC1P18887 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
XRCC1P18887 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
XRCC1P18887 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
XRCC1P18887 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
XRCC1P18887 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.08■□□□□ 0.16
XRCC1P18887 AC142381.1-201ENST00000426099 345 ntBASIC16.08■□□□□ 0.16
XRCC1P18887 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.08■□□□□ 0.16
XRCC1P18887 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.08■□□□□ 0.16
XRCC1P18887 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.08■□□□□ 0.16
XRCC1P18887 AC067863.1-201ENST00000494933 530 ntBASIC16.08■□□□□ 0.16
XRCC1P18887 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.08■□□□□ 0.16
XRCC1P18887 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
XRCC1P18887 ALG1L8P-201ENST00000533887 760 ntBASIC16.08■□□□□ 0.16
XRCC1P18887 AC026150.2-201ENST00000564693 1156 ntBASIC16.08■□□□□ 0.16
XRCC1P18887 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.08■□□□□ 0.16
XRCC1P18887 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.08■□□□□ 0.16
XRCC1P18887 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.08■□□□□ 0.16
XRCC1P18887 AC013268.4-201ENST00000637413 2228 ntBASIC16.08■□□□□ 0.16
XRCC1P18887 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
XRCC1P18887 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
XRCC1P18887 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
XRCC1P18887 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.08■□□□□ 0.16
XRCC1P18887 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
XRCC1P18887 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
XRCC1P18887 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.08■□□□□ 0.16
XRCC1P18887 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
XRCC1P18887 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
XRCC1P18887 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
XRCC1P18887 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
XRCC1P18887 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
XRCC1P18887 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
XRCC1P18887 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.07■□□□□ 0.16
XRCC1P18887 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms