Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DRAP01903 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DRAP01903 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.27■□□□□ 0.36
HLA-DRAP01903 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.27■□□□□ 0.36
HLA-DRAP01903 EEF1DP4-201ENST00000446006 880 ntBASIC17.27■□□□□ 0.36
HLA-DRAP01903 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DRAP01903 AC125807.1-201ENST00000483097 614 ntBASIC17.27■□□□□ 0.36
HLA-DRAP01903 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.27■□□□□ 0.36
HLA-DRAP01903 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.27■□□□□ 0.36
HLA-DRAP01903 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.27■□□□□ 0.36
HLA-DRAP01903 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.27■□□□□ 0.36
HLA-DRAP01903 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.27■□□□□ 0.36
HLA-DRAP01903 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DRAP01903 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DRAP01903 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DRAP01903 REXO1L1P-202ENST00000608646 1974 ntBASIC17.27■□□□□ 0.36
HLA-DRAP01903 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
HLA-DRAP01903 AC018892.3-201ENST00000623986 2499 ntBASIC17.27■□□□□ 0.35
HLA-DRAP01903 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
HLA-DRAP01903 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.27■□□□□ 0.35
HLA-DRAP01903 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.27■□□□□ 0.35
HLA-DRAP01903 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HLA-DRAP01903 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.27■□□□□ 0.35
HLA-DRAP01903 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
HLA-DRAP01903 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DRAP01903 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.26■□□□□ 0.35
HLA-DRAP01903 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.26■□□□□ 0.35
HLA-DRAP01903 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DRAP01903 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DRAP01903 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DRAP01903 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
HLA-DRAP01903 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
HLA-DRAP01903 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
HLA-DRAP01903 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.26■□□□□ 0.35
HLA-DRAP01903 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.26■□□□□ 0.35
HLA-DRAP01903 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DRAP01903 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DRAP01903 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DRAP01903 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
HLA-DRAP01903 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DRAP01903 SPDYE17-201ENST00000412399 783 ntBASIC17.26■□□□□ 0.35
HLA-DRAP01903 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.26■□□□□ 0.35
HLA-DRAP01903 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.26■□□□□ 0.35
HLA-DRAP01903 KLF2P3-201ENST00000451977 1087 ntBASIC17.26■□□□□ 0.35
HLA-DRAP01903 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DRAP01903 AL079307.3-201ENST00000556114 283 ntBASIC17.26■□□□□ 0.35
HLA-DRAP01903 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DRAP01903 AL589739.1-201ENST00000607720 493 ntBASIC17.26■□□□□ 0.35
HLA-DRAP01903 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.26■□□□□ 0.35
HLA-DRAP01903 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
HLA-DRAP01903 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DRAP01903 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
HLA-DRAP01903 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DRAP01903 PRAL-201ENST00000624952 3286 ntBASIC17.26■□□□□ 0.35
HLA-DRAP01903 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DRAP01903 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
HLA-DRAP01903 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
HLA-DRAP01903 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DRAP01903 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DRAP01903 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DRAP01903 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.26■□□□□ 0.35
HLA-DRAP01903 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.26■□□□□ 0.35
HLA-DRAP01903 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DRAP01903 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DRAP01903 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DRAP01903 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DRAP01903 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
HLA-DRAP01903 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DRAP01903 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
HLA-DRAP01903 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DRAP01903 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DRAP01903 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DRAP01903 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DRAP01903 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DRAP01903 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
HLA-DRAP01903 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DRAP01903 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DRAP01903 FAM86GP-201ENST00000448322 971 ntBASIC17.25■□□□□ 0.35
HLA-DRAP01903 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.25■□□□□ 0.35
HLA-DRAP01903 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.25■□□□□ 0.35
HLA-DRAP01903 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DRAP01903 AC067863.1-201ENST00000494933 530 ntBASIC17.25■□□□□ 0.35
HLA-DRAP01903 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.25■□□□□ 0.35
HLA-DRAP01903 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.25■□□□□ 0.35
HLA-DRAP01903 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.25■□□□□ 0.35
HLA-DRAP01903 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.25■□□□□ 0.35
HLA-DRAP01903 SPDYE12P-201ENST00000618416 771 ntBASIC17.25■□□□□ 0.35
HLA-DRAP01903 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.25■□□□□ 0.35
HLA-DRAP01903 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.25■□□□□ 0.35
HLA-DRAP01903 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DRAP01903 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DRAP01903 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.25■□□□□ 0.35
HLA-DRAP01903 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DRAP01903 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
HLA-DRAP01903 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.25■□□□□ 0.35
HLA-DRAP01903 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
HLA-DRAP01903 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DRAP01903 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DRAP01903 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DRAP01903 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms