Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC13.53□□□□□ -0.24
SIX6O95475 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SIX6O95475 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SIX6O95475 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC13.53□□□□□ -0.24
SIX6O95475 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SIX6O95475 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.53□□□□□ -0.24
SIX6O95475 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SIX6O95475 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SIX6O95475 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
SIX6O95475 SIGLEC30P-201ENST00000455569 941 ntBASIC13.53□□□□□ -0.24
SIX6O95475 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
SIX6O95475 CD320-202ENST00000537716 1119 ntTSL 2 BASIC13.53□□□□□ -0.24
SIX6O95475 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SIX6O95475 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC13.53□□□□□ -0.24
SIX6O95475 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC13.53□□□□□ -0.24
SIX6O95475 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC13.53□□□□□ -0.24
SIX6O95475 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SIX6O95475 NAPSB-206ENST00000562112 1266 ntBASIC13.53□□□□□ -0.24
SIX6O95475 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC13.53□□□□□ -0.24
SIX6O95475 MPDU1-223ENST00000582151 728 ntBASIC13.53□□□□□ -0.24
SIX6O95475 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SIX6O95475 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC13.53□□□□□ -0.24
SIX6O95475 SIGLEC29P-201ENST00000599873 1114 ntBASIC13.53□□□□□ -0.24
SIX6O95475 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
SIX6O95475 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
SIX6O95475 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SIX6O95475 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.53□□□□□ -0.24
SIX6O95475 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
SIX6O95475 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
SIX6O95475 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SIX6O95475 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SIX6O95475 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SIX6O95475 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SIX6O95475 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
SIX6O95475 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SIX6O95475 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SIX6O95475 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SIX6O95475 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SIX6O95475 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
SIX6O95475 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
SIX6O95475 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SIX6O95475 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
SIX6O95475 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.53□□□□□ -0.24
SIX6O95475 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SIX6O95475 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SIX6O95475 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SIX6O95475 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SIX6O95475 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
SIX6O95475 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
SIX6O95475 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
SIX6O95475 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
SIX6O95475 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.52□□□□□ -0.24
SIX6O95475 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
SIX6O95475 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
SIX6O95475 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
SIX6O95475 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SIX6O95475 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SIX6O95475 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SIX6O95475 COPE-203ENST00000351079 907 ntTSL 2 BASIC13.52□□□□□ -0.25
SIX6O95475 LINC00982-205ENST00000420957 435 ntBASIC13.52□□□□□ -0.25
SIX6O95475 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC13.52□□□□□ -0.25
SIX6O95475 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC13.52□□□□□ -0.25
SIX6O95475 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC13.52□□□□□ -0.25
SIX6O95475 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SIX6O95475 AC142381.4-202ENST00000563973 229 ntBASIC13.52□□□□□ -0.25
SIX6O95475 P4HB-223ENST00000576390 439 ntTSL 4 BASIC13.52□□□□□ -0.25
SIX6O95475 AL590326.2-201ENST00000625139 305 ntBASIC13.52□□□□□ -0.25
SIX6O95475 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC13.52□□□□□ -0.25
SIX6O95475 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SIX6O95475 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SIX6O95475 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC13.52□□□□□ -0.25
SIX6O95475 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
SIX6O95475 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SIX6O95475 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC13.52□□□□□ -0.25
SIX6O95475 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC13.52□□□□□ -0.25
SIX6O95475 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SIX6O95475 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SIX6O95475 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SIX6O95475 AC005622.1-201ENST00000636801 1703 ntBASIC13.52□□□□□ -0.25
SIX6O95475 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.52□□□□□ -0.25
SIX6O95475 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.52□□□□□ -0.25
SIX6O95475 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SIX6O95475 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SIX6O95475 AL359183.1-201ENST00000623796 2132 ntBASIC13.52□□□□□ -0.25
SIX6O95475 AC006504.5-208ENST00000588784 2401 ntBASIC13.52□□□□□ -0.25
SIX6O95475 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SIX6O95475 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SIX6O95475 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
SIX6O95475 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
SIX6O95475 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
SIX6O95475 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SIX6O95475 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SIX6O95475 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SIX6O95475 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SIX6O95475 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SIX6O95475 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
SIX6O95475 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.51□□□□□ -0.25
SIX6O95475 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SIX6O95475 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SIX6O95475 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms