Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC7.01□□□□□ -1.29
USH2AO75445 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
USH2AO75445 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC7.01□□□□□ -1.29
USH2AO75445 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC7.01□□□□□ -1.29
USH2AO75445 MIR4321-201ENST00000592276 80 ntBASIC7.01□□□□□ -1.29
USH2AO75445 AC020922.3-201ENST00000595064 547 ntBASIC7.01□□□□□ -1.29
USH2AO75445 MEG3_2.1-201ENST00000611456 105 ntBASIC7.01□□□□□ -1.29
USH2AO75445 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC7.01□□□□□ -1.29
USH2AO75445 AC242376.2-201ENST00000619355 883 ntBASIC7.01□□□□□ -1.29
USH2AO75445 DDX5-235ENST00000630471 473 ntTSL 4 BASIC7.01□□□□□ -1.29
USH2AO75445 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC7.01□□□□□ -1.29
USH2AO75445 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC7.01□□□□□ -1.29
USH2AO75445 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC7.01□□□□□ -1.29
USH2AO75445 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC7.01□□□□□ -1.29
USH2AO75445 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC7.01□□□□□ -1.29
USH2AO75445 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
USH2AO75445 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
USH2AO75445 AC011742.3-201ENST00000439053 820 ntBASIC7.01□□□□□ -1.29
USH2AO75445 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC7.01□□□□□ -1.29
USH2AO75445 KRT18P43-201ENST00000469825 1281 ntBASIC7.01□□□□□ -1.29
USH2AO75445 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC7.01□□□□□ -1.29
USH2AO75445 FO393412.1-201ENST00000619841 382 ntBASIC7.01□□□□□ -1.29
USH2AO75445 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
USH2AO75445 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
USH2AO75445 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
USH2AO75445 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
USH2AO75445 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
USH2AO75445 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
USH2AO75445 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
USH2AO75445 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
USH2AO75445 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
USH2AO75445 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC7.01□□□□□ -1.29
USH2AO75445 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
USH2AO75445 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
USH2AO75445 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
USH2AO75445 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
USH2AO75445 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
USH2AO75445 TOMM22P5-201ENST00000416399 439 ntBASIC7.01□□□□□ -1.29
USH2AO75445 NDUFS6P1-201ENST00000485187 316 ntBASIC7.01□□□□□ -1.29
USH2AO75445 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
USH2AO75445 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC7.01□□□□□ -1.29
USH2AO75445 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC7.01□□□□□ -1.29
USH2AO75445 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
USH2AO75445 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC7.01□□□□□ -1.29
USH2AO75445 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
USH2AO75445 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
USH2AO75445 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
USH2AO75445 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
USH2AO75445 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
USH2AO75445 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
USH2AO75445 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC7.01□□□□□ -1.29
USH2AO75445 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
USH2AO75445 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC7.01□□□□□ -1.29
USH2AO75445 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
USH2AO75445 ACKR1-201ENST00000368121 1240 ntBASIC7.01□□□□□ -1.29
USH2AO75445 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC7.01□□□□□ -1.29
USH2AO75445 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC7.01□□□□□ -1.29
USH2AO75445 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC7.01□□□□□ -1.29
USH2AO75445 PCBP2-OT1-201ENST00000634357 590 ntBASIC7.01□□□□□ -1.29
USH2AO75445 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC7.01□□□□□ -1.29
USH2AO75445 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC7.01□□□□□ -1.29
USH2AO75445 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC7.01□□□□□ -1.29
USH2AO75445 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
USH2AO75445 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
USH2AO75445 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC7□□□□□ -1.29
USH2AO75445 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC7□□□□□ -1.29
USH2AO75445 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC7□□□□□ -1.29
USH2AO75445 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
USH2AO75445 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC7□□□□□ -1.29
USH2AO75445 AL645728.1-201ENST00000366221 2101 ntBASIC7□□□□□ -1.29
USH2AO75445 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
USH2AO75445 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC7□□□□□ -1.29
USH2AO75445 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC7□□□□□ -1.29
USH2AO75445 U82695.1-201ENST00000635752 1889 ntBASIC7□□□□□ -1.29
USH2AO75445 AL121723.1-201ENST00000445194 1519 ntBASIC7□□□□□ -1.29
USH2AO75445 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC7□□□□□ -1.29
USH2AO75445 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC7□□□□□ -1.29
USH2AO75445 AC004899.1-201ENST00000424687 1714 ntBASIC7□□□□□ -1.29
USH2AO75445 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
USH2AO75445 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
USH2AO75445 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
USH2AO75445 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
USH2AO75445 PIN4P1-201ENST00000451079 396 ntBASIC7□□□□□ -1.29
USH2AO75445 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC7□□□□□ -1.29
USH2AO75445 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC7□□□□□ -1.29
USH2AO75445 PAM16-215ENST00000577031 548 ntTSL 4 BASIC7□□□□□ -1.29
USH2AO75445 MIR4683-201ENST00000579659 81 ntBASIC7□□□□□ -1.29
USH2AO75445 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC7□□□□□ -1.29
USH2AO75445 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC7□□□□□ -1.29
USH2AO75445 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC7□□□□□ -1.29
USH2AO75445 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
USH2AO75445 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
USH2AO75445 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC7□□□□□ -1.29
USH2AO75445 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC7□□□□□ -1.29
USH2AO75445 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC7□□□□□ -1.29
USH2AO75445 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC7□□□□□ -1.29
USH2AO75445 PHACTR1-203ENST00000379335 943 ntTSL 2 BASIC7□□□□□ -1.29
USH2AO75445 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC7□□□□□ -1.29
USH2AO75445 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC7□□□□□ -1.29
USH2AO75445 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC7□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms