Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF40O75150 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RNF40O75150 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.45■□□□□ 0.38
RNF40O75150 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF40O75150 BCRP1-201ENST00000444246 691 ntBASIC17.45■□□□□ 0.38
RNF40O75150 TIMM8BP1-201ENST00000452384 211 ntBASIC17.45■□□□□ 0.38
RNF40O75150 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.45■□□□□ 0.38
RNF40O75150 SLC25A6P2-201ENST00000497974 877 ntBASIC17.45■□□□□ 0.38
RNF40O75150 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.45■□□□□ 0.38
RNF40O75150 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.45■□□□□ 0.38
RNF40O75150 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC17.45■□□□□ 0.38
RNF40O75150 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.45■□□□□ 0.38
RNF40O75150 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RNF40O75150 LINC00628-201ENST00000628516 1289 ntBASIC17.45■□□□□ 0.38
RNF40O75150 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.45■□□□□ 0.38
RNF40O75150 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
RNF40O75150 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF40O75150 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF40O75150 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF40O75150 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RNF40O75150 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RNF40O75150 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RNF40O75150 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
RNF40O75150 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF40O75150 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC17.45■□□□□ 0.38
RNF40O75150 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RNF40O75150 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF40O75150 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.45■□□□□ 0.38
RNF40O75150 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC17.45■□□□□ 0.38
RNF40O75150 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC17.44■□□□□ 0.38
RNF40O75150 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.44■□□□□ 0.38
RNF40O75150 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF40O75150 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RNF40O75150 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RNF40O75150 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
RNF40O75150 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
RNF40O75150 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF40O75150 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF40O75150 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF40O75150 AL035633.1-201ENST00000406139 838 ntBASIC17.44■□□□□ 0.38
RNF40O75150 ADH5P3-201ENST00000433842 1137 ntBASIC17.44■□□□□ 0.38
RNF40O75150 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RNF40O75150 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.44■□□□□ 0.38
RNF40O75150 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.44■□□□□ 0.38
RNF40O75150 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RNF40O75150 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.44■□□□□ 0.38
RNF40O75150 AKR1B10P2-201ENST00000577332 927 ntBASIC17.44■□□□□ 0.38
RNF40O75150 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RNF40O75150 AL096865.1-201ENST00000606796 927 ntBASIC17.44■□□□□ 0.38
RNF40O75150 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.44■□□□□ 0.38
RNF40O75150 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF40O75150 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC17.44■□□□□ 0.38
RNF40O75150 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF40O75150 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF40O75150 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.44■□□□□ 0.38
RNF40O75150 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.43■□□□□ 0.38
RNF40O75150 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC17.43■□□□□ 0.38
RNF40O75150 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF40O75150 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC17.43■□□□□ 0.38
RNF40O75150 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF40O75150 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
RNF40O75150 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
RNF40O75150 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF40O75150 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF40O75150 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
RNF40O75150 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
RNF40O75150 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF40O75150 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.43■□□□□ 0.38
RNF40O75150 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC17.43■□□□□ 0.38
RNF40O75150 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF40O75150 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF40O75150 AC002056.1-201ENST00000395613 760 ntBASIC17.43■□□□□ 0.38
RNF40O75150 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RNF40O75150 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.43■□□□□ 0.38
RNF40O75150 AC087163.2-201ENST00000457299 853 ntBASIC17.43■□□□□ 0.38
RNF40O75150 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.43■□□□□ 0.38
RNF40O75150 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RNF40O75150 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF40O75150 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.43■□□□□ 0.38
RNF40O75150 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.43■□□□□ 0.38
RNF40O75150 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
RNF40O75150 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF40O75150 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC17.43■□□□□ 0.38
RNF40O75150 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RNF40O75150 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
RNF40O75150 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF40O75150 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF40O75150 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF40O75150 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.43■□□□□ 0.38
RNF40O75150 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
RNF40O75150 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RNF40O75150 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF40O75150 AP005117.1-202ENST00000581724 1908 ntBASIC17.43■□□□□ 0.38
RNF40O75150 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RNF40O75150 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF40O75150 PPT1-215ENST00000641471 2368 ntBASIC17.43■□□□□ 0.38
RNF40O75150 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RNF40O75150 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
RNF40O75150 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF40O75150 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms