Protein–RNA interactions for Protein: O60494

CUBN, Cubilin, humanhuman

Predictions only

Length 3,623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNO60494 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
CUBNO60494 AC078925.2-201ENST00000624013 1973 ntBASIC12.66□□□□□ -0.38
CUBNO60494 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC12.66□□□□□ -0.38
CUBNO60494 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CUBNO60494 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CUBNO60494 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC12.66□□□□□ -0.38
CUBNO60494 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC12.66□□□□□ -0.38
CUBNO60494 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC12.66□□□□□ -0.38
CUBNO60494 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CUBNO60494 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CUBNO60494 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC12.66□□□□□ -0.38
CUBNO60494 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CUBNO60494 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC12.66□□□□□ -0.38
CUBNO60494 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC12.66□□□□□ -0.38
CUBNO60494 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC12.66□□□□□ -0.38
CUBNO60494 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CUBNO60494 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC12.66□□□□□ -0.38
CUBNO60494 AC092364.2-201ENST00000596710 2692 ntBASIC12.66□□□□□ -0.38
CUBNO60494 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC12.66□□□□□ -0.38
CUBNO60494 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CUBNO60494 AC026471.1-201ENST00000564629 3026 ntBASIC12.66□□□□□ -0.38
CUBNO60494 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CUBNO60494 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CUBNO60494 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CUBNO60494 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CUBNO60494 SNX21-203ENST00000372541 771 ntTSL 2 BASIC12.66□□□□□ -0.38
CUBNO60494 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
CUBNO60494 TOMM22P5-201ENST00000416399 439 ntBASIC12.66□□□□□ -0.38
CUBNO60494 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CUBNO60494 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC12.66□□□□□ -0.38
CUBNO60494 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC12.66□□□□□ -0.38
CUBNO60494 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CUBNO60494 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC12.65□□□□□ -0.38
CUBNO60494 AP001094.4-201ENST00000579008 2176 ntBASIC12.65□□□□□ -0.38
CUBNO60494 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
CUBNO60494 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
CUBNO60494 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CUBNO60494 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
CUBNO60494 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
CUBNO60494 AC234644.1-201ENST00000406065 370 ntBASIC12.65□□□□□ -0.38
CUBNO60494 AZGP1P1-201ENST00000411909 902 ntBASIC12.65□□□□□ -0.38
CUBNO60494 AHRR-211ENST00000515206 462 ntTSL 5 BASIC12.65□□□□□ -0.38
CUBNO60494 MBP-227ENST00000526111 581 ntTSL 4 BASIC12.65□□□□□ -0.38
CUBNO60494 RERG-205ENST00000537647 935 ntTSL 2 BASIC12.65□□□□□ -0.38
CUBNO60494 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CUBNO60494 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC12.65□□□□□ -0.38
CUBNO60494 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC12.65□□□□□ -0.38
CUBNO60494 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
CUBNO60494 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
CUBNO60494 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC12.65□□□□□ -0.38
CUBNO60494 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CUBNO60494 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
CUBNO60494 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
CUBNO60494 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
CUBNO60494 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC12.65□□□□□ -0.38
CUBNO60494 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CUBNO60494 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC12.65□□□□□ -0.38
CUBNO60494 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC12.65□□□□□ -0.38
CUBNO60494 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
CUBNO60494 SPTLC1P5-201ENST00000450718 252 ntBASIC12.65□□□□□ -0.38
CUBNO60494 RN7SL11P-201ENST00000471305 293 ntBASIC12.65□□□□□ -0.38
CUBNO60494 AC104596.2-201ENST00000512793 793 ntBASIC12.65□□□□□ -0.38
CUBNO60494 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
CUBNO60494 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
CUBNO60494 EEF1DP1-201ENST00000585891 896 ntBASIC12.65□□□□□ -0.38
CUBNO60494 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
CUBNO60494 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CUBNO60494 GATB-213ENST00000515812 1893 ntTSL 5 BASIC12.65□□□□□ -0.38
CUBNO60494 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CUBNO60494 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CUBNO60494 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
CUBNO60494 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
CUBNO60494 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CUBNO60494 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
CUBNO60494 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
CUBNO60494 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC12.65□□□□□ -0.39
CUBNO60494 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CUBNO60494 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CUBNO60494 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CUBNO60494 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CUBNO60494 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CUBNO60494 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC12.64□□□□□ -0.39
CUBNO60494 VDAC1P7-201ENST00000462417 847 ntBASIC12.64□□□□□ -0.39
CUBNO60494 AC022137.2-201ENST00000503482 481 ntBASIC12.64□□□□□ -0.39
CUBNO60494 FTLP10-202ENST00000505798 471 ntBASIC12.64□□□□□ -0.39
CUBNO60494 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CUBNO60494 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CUBNO60494 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CUBNO60494 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC12.64□□□□□ -0.39
CUBNO60494 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC12.64□□□□□ -0.39
CUBNO60494 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
CUBNO60494 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC12.64□□□□□ -0.39
CUBNO60494 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CUBNO60494 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
CUBNO60494 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CUBNO60494 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CUBNO60494 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
CUBNO60494 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CUBNO60494 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CUBNO60494 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms