Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 AP005117.1-202ENST00000581724 1908 ntBASIC14.35□□□□□ -0.11
TRAF3IP2O43734 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.35□□□□□ -0.11
TRAF3IP2O43734 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAF3IP2O43734 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.35□□□□□ -0.11
TRAF3IP2O43734 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAF3IP2O43734 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAF3IP2O43734 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAF3IP2O43734 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAF3IP2O43734 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TRAF3IP2O43734 AC063926.3-201ENST00000624734 5658 ntBASIC14.34□□□□□ -0.11
TRAF3IP2O43734 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAF3IP2O43734 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAF3IP2O43734 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.34□□□□□ -0.11
TRAF3IP2O43734 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAF3IP2O43734 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAF3IP2O43734 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAF3IP2O43734 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAF3IP2O43734 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
TRAF3IP2O43734 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
TRAF3IP2O43734 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAF3IP2O43734 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.34□□□□□ -0.11
TRAF3IP2O43734 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
TRAF3IP2O43734 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.34□□□□□ -0.11
TRAF3IP2O43734 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TRAF3IP2O43734 SNHG9-202ENST00000564014 471 ntBASIC14.34□□□□□ -0.11
TRAF3IP2O43734 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.34□□□□□ -0.11
TRAF3IP2O43734 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.34□□□□□ -0.11
TRAF3IP2O43734 AL596442.2-201ENST00000610240 980 ntBASIC14.34□□□□□ -0.11
TRAF3IP2O43734 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.34□□□□□ -0.11
TRAF3IP2O43734 AC139530.3-201ENST00000620344 690 ntBASIC14.34□□□□□ -0.11
TRAF3IP2O43734 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.34□□□□□ -0.11
TRAF3IP2O43734 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TRAF3IP2O43734 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAF3IP2O43734 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAF3IP2O43734 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAF3IP2O43734 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAF3IP2O43734 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAF3IP2O43734 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAF3IP2O43734 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAF3IP2O43734 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
TRAF3IP2O43734 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAF3IP2O43734 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAF3IP2O43734 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAF3IP2O43734 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAF3IP2O43734 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.11
TRAF3IP2O43734 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRAF3IP2O43734 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
TRAF3IP2O43734 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAF3IP2O43734 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.33□□□□□ -0.12
TRAF3IP2O43734 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAF3IP2O43734 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAF3IP2O43734 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAF3IP2O43734 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAF3IP2O43734 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAF3IP2O43734 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.33□□□□□ -0.12
TRAF3IP2O43734 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAF3IP2O43734 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAF3IP2O43734 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAF3IP2O43734 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAF3IP2O43734 AL139010.1-201ENST00000454878 894 ntBASIC14.33□□□□□ -0.12
TRAF3IP2O43734 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.33□□□□□ -0.12
TRAF3IP2O43734 BANF1P1-201ENST00000553684 263 ntBASIC14.33□□□□□ -0.12
TRAF3IP2O43734 AC026979.3-201ENST00000607315 403 ntBASIC14.33□□□□□ -0.12
TRAF3IP2O43734 AC018529.1-201ENST00000613063 361 ntBASIC14.33□□□□□ -0.12
TRAF3IP2O43734 AL691403.2-201ENST00000618460 490 ntBASIC14.33□□□□□ -0.12
TRAF3IP2O43734 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
TRAF3IP2O43734 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
TRAF3IP2O43734 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAF3IP2O43734 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.33□□□□□ -0.12
TRAF3IP2O43734 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAF3IP2O43734 BNIP3P1-202ENST00000550043 1585 ntBASIC14.33□□□□□ -0.12
TRAF3IP2O43734 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAF3IP2O43734 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAF3IP2O43734 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAF3IP2O43734 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.33□□□□□ -0.12
TRAF3IP2O43734 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TRAF3IP2O43734 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAF3IP2O43734 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAF3IP2O43734 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAF3IP2O43734 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAF3IP2O43734 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAF3IP2O43734 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.33□□□□□ -0.12
TRAF3IP2O43734 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAF3IP2O43734 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAF3IP2O43734 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAF3IP2O43734 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
TRAF3IP2O43734 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAF3IP2O43734 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAF3IP2O43734 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAF3IP2O43734 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAF3IP2O43734 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAF3IP2O43734 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAF3IP2O43734 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAF3IP2O43734 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAF3IP2O43734 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAF3IP2O43734 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAF3IP2O43734 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.32□□□□□ -0.12
TRAF3IP2O43734 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAF3IP2O43734 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAF3IP2O43734 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms