Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
FOXN1O15353 FAM220BP-201ENST00000377689 816 ntBASIC19.14■□□□□ 0.65
FOXN1O15353 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXN1O15353 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
FOXN1O15353 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
FOXN1O15353 UPF3AP2-201ENST00000457924 1132 ntBASIC19.14■□□□□ 0.65
FOXN1O15353 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC19.14■□□□□ 0.65
FOXN1O15353 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC19.14■□□□□ 0.65
FOXN1O15353 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC19.14■□□□□ 0.65
FOXN1O15353 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC19.14■□□□□ 0.65
FOXN1O15353 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
FOXN1O15353 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC19.14■□□□□ 0.65
FOXN1O15353 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
FOXN1O15353 AC020765.3-201ENST00000613051 740 ntBASIC19.14■□□□□ 0.65
FOXN1O15353 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC19.14■□□□□ 0.65
FOXN1O15353 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXN1O15353 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
FOXN1O15353 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC19.14■□□□□ 0.65
FOXN1O15353 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXN1O15353 KRT8P19-201ENST00000551916 1455 ntBASIC19.14■□□□□ 0.65
FOXN1O15353 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC19.14■□□□□ 0.65
FOXN1O15353 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
FOXN1O15353 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXN1O15353 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXN1O15353 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
FOXN1O15353 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXN1O15353 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXN1O15353 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXN1O15353 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC19.13■□□□□ 0.65
FOXN1O15353 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC19.13■□□□□ 0.65
FOXN1O15353 DOC2GP-204ENST00000639052 2548 ntBASIC19.13■□□□□ 0.65
FOXN1O15353 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXN1O15353 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
FOXN1O15353 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXN1O15353 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC19.13■□□□□ 0.65
FOXN1O15353 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXN1O15353 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
FOXN1O15353 LBH-202ENST00000401506 485 ntTSL 3 BASIC19.13■□□□□ 0.65
FOXN1O15353 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
FOXN1O15353 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
FOXN1O15353 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXN1O15353 ARTN-209ENST00000479128 471 ntTSL 3 BASIC19.13■□□□□ 0.65
FOXN1O15353 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC19.13■□□□□ 0.65
FOXN1O15353 MAX-210ENST00000555419 765 ntTSL 5 BASIC19.13■□□□□ 0.65
FOXN1O15353 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC19.13■□□□□ 0.65
FOXN1O15353 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC19.13■□□□□ 0.65
FOXN1O15353 AL022328.3-201ENST00000607943 679 ntBASIC19.13■□□□□ 0.65
FOXN1O15353 AL022328.1-201ENST00000610050 478 ntBASIC19.13■□□□□ 0.65
FOXN1O15353 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXN1O15353 CLK3P2-201ENST00000427566 1453 ntBASIC19.13■□□□□ 0.65
FOXN1O15353 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXN1O15353 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXN1O15353 AL391256.1-201ENST00000443260 1855 ntBASIC19.13■□□□□ 0.65
FOXN1O15353 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
FOXN1O15353 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC19.13■□□□□ 0.65
FOXN1O15353 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
FOXN1O15353 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
FOXN1O15353 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
FOXN1O15353 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXN1O15353 LINC02199-201ENST00000506655 2702 ntBASIC19.13■□□□□ 0.65
FOXN1O15353 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FOXN1O15353 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
FOXN1O15353 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC19.12■□□□□ 0.65
FOXN1O15353 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC19.12■□□□□ 0.65
FOXN1O15353 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC19.12■□□□□ 0.65
FOXN1O15353 AC006449.5-201ENST00000610658 2098 ntBASIC19.12■□□□□ 0.65
FOXN1O15353 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
FOXN1O15353 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC19.12■□□□□ 0.65
FOXN1O15353 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FOXN1O15353 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FOXN1O15353 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC19.12■□□□□ 0.65
FOXN1O15353 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
FOXN1O15353 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC19.12■□□□□ 0.65
FOXN1O15353 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FOXN1O15353 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
FOXN1O15353 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
FOXN1O15353 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC19.12■□□□□ 0.65
FOXN1O15353 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC19.12■□□□□ 0.65
FOXN1O15353 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC19.12■□□□□ 0.65
FOXN1O15353 YBX1P6-201ENST00000442962 1002 ntBASIC19.12■□□□□ 0.65
FOXN1O15353 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC19.12■□□□□ 0.65
FOXN1O15353 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC19.12■□□□□ 0.65
FOXN1O15353 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC19.12■□□□□ 0.65
FOXN1O15353 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC19.12■□□□□ 0.65
FOXN1O15353 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FOXN1O15353 RERG-205ENST00000537647 935 ntTSL 2 BASIC19.12■□□□□ 0.65
FOXN1O15353 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC19.12■□□□□ 0.65
FOXN1O15353 RN7SL560P-201ENST00000577943 264 ntBASIC19.12■□□□□ 0.65
FOXN1O15353 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
FOXN1O15353 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC19.12■□□□□ 0.65
FOXN1O15353 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC19.12■□□□□ 0.65
FOXN1O15353 ABBA01031663.1-201ENST00000635630 790 ntBASIC19.12■□□□□ 0.65
FOXN1O15353 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
FOXN1O15353 ALOX12P2-203ENST00000570921 1945 ntBASIC19.12■□□□□ 0.65
FOXN1O15353 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC19.12■□□□□ 0.65
FOXN1O15353 AC008741.2-201ENST00000612792 3115 ntBASIC19.11■□□□□ 0.65
FOXN1O15353 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC19.11■□□□□ 0.65
FOXN1O15353 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FOXN1O15353 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FOXN1O15353 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms