Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.81■□□□□ 0.12
CDC7O00311 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDC7O00311 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.81■□□□□ 0.12
CDC7O00311 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDC7O00311 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.81■□□□□ 0.12
CDC7O00311 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDC7O00311 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDC7O00311 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.81■□□□□ 0.12
CDC7O00311 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDC7O00311 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CDC7O00311 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDC7O00311 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CDC7O00311 NFIC-211ENST00000641145 8399 ntBASIC15.8■□□□□ 0.12
CDC7O00311 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDC7O00311 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDC7O00311 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.8■□□□□ 0.12
CDC7O00311 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.8■□□□□ 0.12
CDC7O00311 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CDC7O00311 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.8■□□□□ 0.12
CDC7O00311 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDC7O00311 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.8■□□□□ 0.12
CDC7O00311 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CDC7O00311 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDC7O00311 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDC7O00311 AC073347.1-201ENST00000421633 2643 ntBASIC15.8■□□□□ 0.12
CDC7O00311 TSPY26P-202ENST00000565928 3884 ntBASIC15.8■□□□□ 0.12
CDC7O00311 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.8■□□□□ 0.12
CDC7O00311 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDC7O00311 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDC7O00311 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDC7O00311 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDC7O00311 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.8■□□□□ 0.12
CDC7O00311 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.8■□□□□ 0.12
CDC7O00311 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.8■□□□□ 0.12
CDC7O00311 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.8■□□□□ 0.12
CDC7O00311 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.8■□□□□ 0.12
CDC7O00311 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.8■□□□□ 0.12
CDC7O00311 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CDC7O00311 MTDHP5-201ENST00000598980 586 ntBASIC15.8■□□□□ 0.12
CDC7O00311 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
CDC7O00311 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.8■□□□□ 0.12
CDC7O00311 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CDC7O00311 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDC7O00311 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDC7O00311 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDC7O00311 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDC7O00311 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDC7O00311 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDC7O00311 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDC7O00311 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.8■□□□□ 0.12
CDC7O00311 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDC7O00311 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.8■□□□□ 0.12
CDC7O00311 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDC7O00311 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.8■□□□□ 0.12
CDC7O00311 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
CDC7O00311 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDC7O00311 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.79■□□□□ 0.12
CDC7O00311 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDC7O00311 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CDC7O00311 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDC7O00311 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
CDC7O00311 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDC7O00311 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CDC7O00311 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDC7O00311 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.79■□□□□ 0.12
CDC7O00311 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDC7O00311 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDC7O00311 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.79■□□□□ 0.12
CDC7O00311 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDC7O00311 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDC7O00311 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDC7O00311 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDC7O00311 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDC7O00311 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDC7O00311 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.79■□□□□ 0.12
CDC7O00311 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.79■□□□□ 0.12
CDC7O00311 MKNK2P1-201ENST00000437526 628 ntBASIC15.79■□□□□ 0.12
CDC7O00311 ACTG1P14-201ENST00000446382 1122 ntBASIC15.79■□□□□ 0.12
CDC7O00311 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.79■□□□□ 0.12
CDC7O00311 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.79■□□□□ 0.12
CDC7O00311 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.79■□□□□ 0.12
CDC7O00311 IGHV3-62-201ENST00000520057 340 ntBASIC15.79■□□□□ 0.12
CDC7O00311 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.79■□□□□ 0.12
CDC7O00311 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.79■□□□□ 0.12
CDC7O00311 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.79■□□□□ 0.12
CDC7O00311 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDC7O00311 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDC7O00311 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.79■□□□□ 0.12
CDC7O00311 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CDC7O00311 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDC7O00311 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDC7O00311 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CDC7O00311 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDC7O00311 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.79■□□□□ 0.12
CDC7O00311 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDC7O00311 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDC7O00311 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.79■□□□□ 0.12
CDC7O00311 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.79■□□□□ 0.12
CDC7O00311 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDC7O00311 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms