Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TCRBV7S3A2A0A539 KRT18P3-201ENST00000451602 1288 ntBASIC16.35■□□□□ 0.21
TCRBV7S3A2A0A539 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TCRBV7S3A2A0A539 AC098859.1-201ENST00000502915 1238 ntBASIC16.35■□□□□ 0.21
TCRBV7S3A2A0A539 AC112191.1-201ENST00000523689 701 ntBASIC16.35■□□□□ 0.21
TCRBV7S3A2A0A539 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
TCRBV7S3A2A0A539 AC106730.1-201ENST00000566722 1090 ntBASIC16.35■□□□□ 0.21
TCRBV7S3A2A0A539 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.35■□□□□ 0.21
TCRBV7S3A2A0A539 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.35■□□□□ 0.21
TCRBV7S3A2A0A539 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.35■□□□□ 0.21
TCRBV7S3A2A0A539 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.35■□□□□ 0.21
TCRBV7S3A2A0A539 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TCRBV7S3A2A0A539 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TCRBV7S3A2A0A539 AC091812.2-201ENST00000619081 385 ntBASIC16.35■□□□□ 0.21
TCRBV7S3A2A0A539 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.35■□□□□ 0.21
TCRBV7S3A2A0A539 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TCRBV7S3A2A0A539 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.35■□□□□ 0.21
TCRBV7S3A2A0A539 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.35■□□□□ 0.21
TCRBV7S3A2A0A539 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TCRBV7S3A2A0A539 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TCRBV7S3A2A0A539 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TCRBV7S3A2A0A539 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TCRBV7S3A2A0A539 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
TCRBV7S3A2A0A539 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TCRBV7S3A2A0A539 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TCRBV7S3A2A0A539 ZNF259P1-201ENST00000407656 1365 ntBASIC16.35■□□□□ 0.21
TCRBV7S3A2A0A539 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TCRBV7S3A2A0A539 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
TCRBV7S3A2A0A539 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.35■□□□□ 0.21
TCRBV7S3A2A0A539 AL691432.1-201ENST00000596308 1422 ntBASIC16.35■□□□□ 0.21
TCRBV7S3A2A0A539 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TCRBV7S3A2A0A539 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TCRBV7S3A2A0A539 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TCRBV7S3A2A0A539 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TCRBV7S3A2A0A539 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TCRBV7S3A2A0A539 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TCRBV7S3A2A0A539 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TCRBV7S3A2A0A539 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.34■□□□□ 0.21
TCRBV7S3A2A0A539 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TCRBV7S3A2A0A539 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.34■□□□□ 0.21
TCRBV7S3A2A0A539 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.34■□□□□ 0.21
TCRBV7S3A2A0A539 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TCRBV7S3A2A0A539 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TCRBV7S3A2A0A539 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TCRBV7S3A2A0A539 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TCRBV7S3A2A0A539 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TCRBV7S3A2A0A539 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.34■□□□□ 0.21
TCRBV7S3A2A0A539 MED15P5-201ENST00000423150 992 ntBASIC16.34■□□□□ 0.21
TCRBV7S3A2A0A539 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.34■□□□□ 0.21
TCRBV7S3A2A0A539 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.34■□□□□ 0.21
TCRBV7S3A2A0A539 RNA5SP416-201ENST00000516838 111 ntBASIC16.34■□□□□ 0.21
TCRBV7S3A2A0A539 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.34■□□□□ 0.21
TCRBV7S3A2A0A539 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.34■□□□□ 0.21
TCRBV7S3A2A0A539 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.34■□□□□ 0.21
TCRBV7S3A2A0A539 AL135744.1-201ENST00000565098 629 ntBASIC16.34■□□□□ 0.21
TCRBV7S3A2A0A539 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.34■□□□□ 0.21
TCRBV7S3A2A0A539 AC027307.2-201ENST00000591252 911 ntBASIC16.34■□□□□ 0.21
TCRBV7S3A2A0A539 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.34■□□□□ 0.21
TCRBV7S3A2A0A539 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.34■□□□□ 0.21
TCRBV7S3A2A0A539 AC120114.3-201ENST00000611923 658 ntBASIC16.34■□□□□ 0.21
TCRBV7S3A2A0A539 BX640515.1-201ENST00000617215 977 ntBASIC16.34■□□□□ 0.21
TCRBV7S3A2A0A539 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
TCRBV7S3A2A0A539 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TCRBV7S3A2A0A539 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TCRBV7S3A2A0A539 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.34■□□□□ 0.21
TCRBV7S3A2A0A539 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TCRBV7S3A2A0A539 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.34■□□□□ 0.21
TCRBV7S3A2A0A539 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TCRBV7S3A2A0A539 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TCRBV7S3A2A0A539 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TCRBV7S3A2A0A539 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.34■□□□□ 0.21
TCRBV7S3A2A0A539 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TCRBV7S3A2A0A539 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.34■□□□□ 0.21
TCRBV7S3A2A0A539 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TCRBV7S3A2A0A539 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
TCRBV7S3A2A0A539 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TCRBV7S3A2A0A539 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.34■□□□□ 0.21
TCRBV7S3A2A0A539 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.34■□□□□ 0.21
TCRBV7S3A2A0A539 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.34■□□□□ 0.21
TCRBV7S3A2A0A539 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TCRBV7S3A2A0A539 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TCRBV7S3A2A0A539 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
TCRBV7S3A2A0A539 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TCRBV7S3A2A0A539 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TCRBV7S3A2A0A539 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TCRBV7S3A2A0A539 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
TCRBV7S3A2A0A539 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
TCRBV7S3A2A0A539 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.33■□□□□ 0.21
TCRBV7S3A2A0A539 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
TCRBV7S3A2A0A539 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
TCRBV7S3A2A0A539 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.33■□□□□ 0.21
TCRBV7S3A2A0A539 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.21
TCRBV7S3A2A0A539 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.33■□□□□ 0.21
TCRBV7S3A2A0A539 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.33■□□□□ 0.21
TCRBV7S3A2A0A539 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
TCRBV7S3A2A0A539 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TCRBV7S3A2A0A539 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.33■□□□□ 0.2
TCRBV7S3A2A0A539 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.33■□□□□ 0.2
TCRBV7S3A2A0A539 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TCRBV7S3A2A0A539 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms