Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP4B1Q9Y6B7 AP002414.3-201ENST00000589352 1468 ntBASIC15.56■□□□□ 0.08
AP4B1Q9Y6B7 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
AP4B1Q9Y6B7 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP4B1Q9Y6B7 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP4B1Q9Y6B7 AC069224.1-201ENST00000566372 1715 ntBASIC15.56■□□□□ 0.08
AP4B1Q9Y6B7 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.56■□□□□ 0.08
AP4B1Q9Y6B7 REXO1L8P-201ENST00000604378 1897 ntBASIC15.56■□□□□ 0.08
AP4B1Q9Y6B7 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
AP4B1Q9Y6B7 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP4B1Q9Y6B7 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
AP4B1Q9Y6B7 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.56■□□□□ 0.08
AP4B1Q9Y6B7 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.56■□□□□ 0.08
AP4B1Q9Y6B7 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP4B1Q9Y6B7 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP4B1Q9Y6B7 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP4B1Q9Y6B7 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
AP4B1Q9Y6B7 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
AP4B1Q9Y6B7 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP4B1Q9Y6B7 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
AP4B1Q9Y6B7 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP4B1Q9Y6B7 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP4B1Q9Y6B7 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP4B1Q9Y6B7 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.55■□□□□ 0.08
AP4B1Q9Y6B7 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.55■□□□□ 0.08
AP4B1Q9Y6B7 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.55■□□□□ 0.08
AP4B1Q9Y6B7 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.55■□□□□ 0.08
AP4B1Q9Y6B7 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP4B1Q9Y6B7 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP4B1Q9Y6B7 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.55■□□□□ 0.08
AP4B1Q9Y6B7 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.55■□□□□ 0.08
AP4B1Q9Y6B7 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP4B1Q9Y6B7 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.55■□□□□ 0.08
AP4B1Q9Y6B7 AC006504.4-201ENST00000592118 1568 ntBASIC15.55■□□□□ 0.08
AP4B1Q9Y6B7 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP4B1Q9Y6B7 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP4B1Q9Y6B7 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
AP4B1Q9Y6B7 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.55■□□□□ 0.08
AP4B1Q9Y6B7 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
AP4B1Q9Y6B7 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.55■□□□□ 0.08
AP4B1Q9Y6B7 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.55■□□□□ 0.08
AP4B1Q9Y6B7 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP4B1Q9Y6B7 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
AP4B1Q9Y6B7 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.55■□□□□ 0.08
AP4B1Q9Y6B7 ELK2BP-201ENST00000415014 1224 ntBASIC15.55■□□□□ 0.08
AP4B1Q9Y6B7 AC098831.1-202ENST00000438821 336 ntBASIC15.55■□□□□ 0.08
AP4B1Q9Y6B7 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.55■□□□□ 0.08
AP4B1Q9Y6B7 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.55■□□□□ 0.08
AP4B1Q9Y6B7 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
AP4B1Q9Y6B7 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.55■□□□□ 0.08
AP4B1Q9Y6B7 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.55■□□□□ 0.08
AP4B1Q9Y6B7 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.55■□□□□ 0.08
AP4B1Q9Y6B7 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.55■□□□□ 0.08
AP4B1Q9Y6B7 AC120114.3-201ENST00000611923 658 ntBASIC15.55■□□□□ 0.08
AP4B1Q9Y6B7 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP4B1Q9Y6B7 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP4B1Q9Y6B7 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
AP4B1Q9Y6B7 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.55■□□□□ 0.08
AP4B1Q9Y6B7 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
AP4B1Q9Y6B7 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
AP4B1Q9Y6B7 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
AP4B1Q9Y6B7 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.55■□□□□ 0.08
AP4B1Q9Y6B7 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP4B1Q9Y6B7 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
AP4B1Q9Y6B7 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.55■□□□□ 0.08
AP4B1Q9Y6B7 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP4B1Q9Y6B7 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
AP4B1Q9Y6B7 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
AP4B1Q9Y6B7 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP4B1Q9Y6B7 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP4B1Q9Y6B7 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP4B1Q9Y6B7 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.54■□□□□ 0.08
AP4B1Q9Y6B7 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.54■□□□□ 0.08
AP4B1Q9Y6B7 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.54■□□□□ 0.08
AP4B1Q9Y6B7 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP4B1Q9Y6B7 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
AP4B1Q9Y6B7 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.54■□□□□ 0.08
AP4B1Q9Y6B7 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
AP4B1Q9Y6B7 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
AP4B1Q9Y6B7 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP4B1Q9Y6B7 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP4B1Q9Y6B7 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
AP4B1Q9Y6B7 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.54■□□□□ 0.08
AP4B1Q9Y6B7 AL590787.1-201ENST00000568856 1315 ntBASIC15.54■□□□□ 0.08
AP4B1Q9Y6B7 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.54■□□□□ 0.08
AP4B1Q9Y6B7 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP4B1Q9Y6B7 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP4B1Q9Y6B7 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP4B1Q9Y6B7 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.54■□□□□ 0.08
AP4B1Q9Y6B7 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.54■□□□□ 0.08
AP4B1Q9Y6B7 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.54■□□□□ 0.08
AP4B1Q9Y6B7 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.54■□□□□ 0.08
AP4B1Q9Y6B7 IGHV3-22-201ENST00000520721 359 ntBASIC15.54■□□□□ 0.08
AP4B1Q9Y6B7 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.54■□□□□ 0.08
AP4B1Q9Y6B7 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.54■□□□□ 0.08
AP4B1Q9Y6B7 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.54■□□□□ 0.08
AP4B1Q9Y6B7 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
AP4B1Q9Y6B7 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.54■□□□□ 0.08
AP4B1Q9Y6B7 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
AP4B1Q9Y6B7 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms