Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 DDT-206ENST00000430101 573 ntTSL 2 BASIC12.24□□□□□ -0.45
TRAPPC1Q9Y5R8 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TRAPPC1Q9Y5R8 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
TRAPPC1Q9Y5R8 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TRAPPC1Q9Y5R8 AC105250.1-201ENST00000509378 2057 ntBASIC12.24□□□□□ -0.45
TRAPPC1Q9Y5R8 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRAPPC1Q9Y5R8 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC12.24□□□□□ -0.45
TRAPPC1Q9Y5R8 AC136759.1-202ENST00000530858 2194 ntBASIC12.24□□□□□ -0.45
TRAPPC1Q9Y5R8 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC12.24□□□□□ -0.45
TRAPPC1Q9Y5R8 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC12.24□□□□□ -0.45
TRAPPC1Q9Y5R8 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC12.24□□□□□ -0.45
TRAPPC1Q9Y5R8 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC12.24□□□□□ -0.45
TRAPPC1Q9Y5R8 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
TRAPPC1Q9Y5R8 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRAPPC1Q9Y5R8 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRAPPC1Q9Y5R8 AC233263.1-201ENST00000578059 224 ntBASIC12.24□□□□□ -0.45
TRAPPC1Q9Y5R8 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC12.24□□□□□ -0.45
TRAPPC1Q9Y5R8 AC009336.1-201ENST00000608941 1553 ntBASIC12.24□□□□□ -0.45
TRAPPC1Q9Y5R8 AC080038.1-201ENST00000611274 1154 ntBASIC12.24□□□□□ -0.45
TRAPPC1Q9Y5R8 AC073912.3-201ENST00000624414 853 ntBASIC12.24□□□□□ -0.45
TRAPPC1Q9Y5R8 PFKL-212ENST00000628044 129 ntTSL 3 BASIC12.24□□□□□ -0.45
TRAPPC1Q9Y5R8 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
TRAPPC1Q9Y5R8 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC12.24□□□□□ -0.45
TRAPPC1Q9Y5R8 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRAPPC1Q9Y5R8 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRAPPC1Q9Y5R8 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
TRAPPC1Q9Y5R8 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC12.24□□□□□ -0.45
TRAPPC1Q9Y5R8 INTS4P1-203ENST00000641008 3683 ntBASIC12.24□□□□□ -0.45
TRAPPC1Q9Y5R8 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
TRAPPC1Q9Y5R8 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRAPPC1Q9Y5R8 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRAPPC1Q9Y5R8 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TRAPPC1Q9Y5R8 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
TRAPPC1Q9Y5R8 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRAPPC1Q9Y5R8 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
TRAPPC1Q9Y5R8 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRAPPC1Q9Y5R8 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRAPPC1Q9Y5R8 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TRAPPC1Q9Y5R8 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
TRAPPC1Q9Y5R8 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC12.23□□□□□ -0.45
TRAPPC1Q9Y5R8 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
TRAPPC1Q9Y5R8 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAPPC1Q9Y5R8 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC12.23□□□□□ -0.45
TRAPPC1Q9Y5R8 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAPPC1Q9Y5R8 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAPPC1Q9Y5R8 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAPPC1Q9Y5R8 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC12.23□□□□□ -0.45
TRAPPC1Q9Y5R8 AL049757.1-201ENST00000616842 1596 ntBASIC12.23□□□□□ -0.45
TRAPPC1Q9Y5R8 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAPPC1Q9Y5R8 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAPPC1Q9Y5R8 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
TRAPPC1Q9Y5R8 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
TRAPPC1Q9Y5R8 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAPPC1Q9Y5R8 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TRAPPC1Q9Y5R8 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TRAPPC1Q9Y5R8 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAPPC1Q9Y5R8 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAPPC1Q9Y5R8 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAPPC1Q9Y5R8 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAPPC1Q9Y5R8 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC12.23□□□□□ -0.45
TRAPPC1Q9Y5R8 AC026185.1-201ENST00000445748 174 ntBASIC12.23□□□□□ -0.45
TRAPPC1Q9Y5R8 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC12.23□□□□□ -0.45
TRAPPC1Q9Y5R8 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC12.23□□□□□ -0.45
TRAPPC1Q9Y5R8 AF186192.3-201ENST00000583427 947 ntBASIC12.23□□□□□ -0.45
TRAPPC1Q9Y5R8 AC005332.3-201ENST00000589904 676 ntBASIC12.23□□□□□ -0.45
TRAPPC1Q9Y5R8 USF2-205ENST00000594064 1179 ntTSL 2 BASIC12.23□□□□□ -0.45
TRAPPC1Q9Y5R8 AL023803.3-201ENST00000615559 522 ntBASIC12.23□□□□□ -0.45
TRAPPC1Q9Y5R8 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAPPC1Q9Y5R8 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
TRAPPC1Q9Y5R8 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TRAPPC1Q9Y5R8 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAPPC1Q9Y5R8 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAPPC1Q9Y5R8 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAPPC1Q9Y5R8 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAPPC1Q9Y5R8 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
TRAPPC1Q9Y5R8 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAPPC1Q9Y5R8 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
TRAPPC1Q9Y5R8 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC12.23□□□□□ -0.45
TRAPPC1Q9Y5R8 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC12.23□□□□□ -0.45
TRAPPC1Q9Y5R8 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TRAPPC1Q9Y5R8 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC12.23□□□□□ -0.45
TRAPPC1Q9Y5R8 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
TRAPPC1Q9Y5R8 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC12.23□□□□□ -0.45
TRAPPC1Q9Y5R8 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAPPC1Q9Y5R8 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TRAPPC1Q9Y5R8 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAPPC1Q9Y5R8 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TRAPPC1Q9Y5R8 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC12.22□□□□□ -0.45
TRAPPC1Q9Y5R8 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAPPC1Q9Y5R8 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TRAPPC1Q9Y5R8 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAPPC1Q9Y5R8 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAPPC1Q9Y5R8 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAPPC1Q9Y5R8 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAPPC1Q9Y5R8 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TRAPPC1Q9Y5R8 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAPPC1Q9Y5R8 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAPPC1Q9Y5R8 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAPPC1Q9Y5R8 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAPPC1Q9Y5R8 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms