Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ERGIC3Q9Y282 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC14.78□□□□□ -0.04
ERGIC3Q9Y282 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ERGIC3Q9Y282 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ERGIC3Q9Y282 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC14.78□□□□□ -0.04
ERGIC3Q9Y282 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ERGIC3Q9Y282 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.78□□□□□ -0.04
ERGIC3Q9Y282 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC14.78□□□□□ -0.04
ERGIC3Q9Y282 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC14.78□□□□□ -0.04
ERGIC3Q9Y282 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC14.78□□□□□ -0.04
ERGIC3Q9Y282 PGM5P2-202ENST00000637225 1043 ntBASIC14.78□□□□□ -0.04
ERGIC3Q9Y282 AP000867.4-201ENST00000641616 219 ntBASIC14.78□□□□□ -0.04
ERGIC3Q9Y282 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
ERGIC3Q9Y282 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ERGIC3Q9Y282 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.78□□□□□ -0.04
ERGIC3Q9Y282 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.78□□□□□ -0.04
ERGIC3Q9Y282 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ERGIC3Q9Y282 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
ERGIC3Q9Y282 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ERGIC3Q9Y282 AC107918.4-201ENST00000641966 3141 ntBASIC14.78□□□□□ -0.04
ERGIC3Q9Y282 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ERGIC3Q9Y282 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.78□□□□□ -0.04
ERGIC3Q9Y282 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ERGIC3Q9Y282 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
ERGIC3Q9Y282 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ERGIC3Q9Y282 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ERGIC3Q9Y282 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ERGIC3Q9Y282 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
ERGIC3Q9Y282 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
ERGIC3Q9Y282 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.77□□□□□ -0.04
ERGIC3Q9Y282 AC092919.2-201ENST00000623631 1645 ntBASIC14.77□□□□□ -0.04
ERGIC3Q9Y282 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ERGIC3Q9Y282 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
ERGIC3Q9Y282 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.77□□□□□ -0.04
ERGIC3Q9Y282 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.77□□□□□ -0.04
ERGIC3Q9Y282 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
ERGIC3Q9Y282 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC14.77□□□□□ -0.04
ERGIC3Q9Y282 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ERGIC3Q9Y282 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ERGIC3Q9Y282 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ERGIC3Q9Y282 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
ERGIC3Q9Y282 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
ERGIC3Q9Y282 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.77□□□□□ -0.04
ERGIC3Q9Y282 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
ERGIC3Q9Y282 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
ERGIC3Q9Y282 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.77□□□□□ -0.04
ERGIC3Q9Y282 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
ERGIC3Q9Y282 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.77□□□□□ -0.04
ERGIC3Q9Y282 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
ERGIC3Q9Y282 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ERGIC3Q9Y282 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
ERGIC3Q9Y282 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ERGIC3Q9Y282 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
ERGIC3Q9Y282 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
ERGIC3Q9Y282 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.77□□□□□ -0.05
ERGIC3Q9Y282 AC113347.1-201ENST00000413321 391 ntBASIC14.77□□□□□ -0.05
ERGIC3Q9Y282 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ERGIC3Q9Y282 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
ERGIC3Q9Y282 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ERGIC3Q9Y282 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC14.77□□□□□ -0.05
ERGIC3Q9Y282 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ERGIC3Q9Y282 AC011498.5-201ENST00000592027 486 ntBASIC14.77□□□□□ -0.05
ERGIC3Q9Y282 AC020765.3-201ENST00000613051 740 ntBASIC14.77□□□□□ -0.05
ERGIC3Q9Y282 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC14.77□□□□□ -0.05
ERGIC3Q9Y282 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
ERGIC3Q9Y282 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC14.77□□□□□ -0.05
ERGIC3Q9Y282 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ERGIC3Q9Y282 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ERGIC3Q9Y282 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
ERGIC3Q9Y282 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
ERGIC3Q9Y282 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
ERGIC3Q9Y282 AC131009.4-201ENST00000624048 1740 ntBASIC14.77□□□□□ -0.05
ERGIC3Q9Y282 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ERGIC3Q9Y282 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.77□□□□□ -0.05
ERGIC3Q9Y282 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.77□□□□□ -0.05
ERGIC3Q9Y282 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
ERGIC3Q9Y282 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.77□□□□□ -0.05
ERGIC3Q9Y282 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ERGIC3Q9Y282 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ERGIC3Q9Y282 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.76□□□□□ -0.05
ERGIC3Q9Y282 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
ERGIC3Q9Y282 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.76□□□□□ -0.05
ERGIC3Q9Y282 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
ERGIC3Q9Y282 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
ERGIC3Q9Y282 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ERGIC3Q9Y282 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.76□□□□□ -0.05
ERGIC3Q9Y282 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ERGIC3Q9Y282 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ERGIC3Q9Y282 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ERGIC3Q9Y282 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.76□□□□□ -0.05
ERGIC3Q9Y282 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC14.76□□□□□ -0.05
ERGIC3Q9Y282 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
ERGIC3Q9Y282 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.76□□□□□ -0.05
ERGIC3Q9Y282 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
ERGIC3Q9Y282 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ERGIC3Q9Y282 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ERGIC3Q9Y282 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
ERGIC3Q9Y282 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
ERGIC3Q9Y282 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
ERGIC3Q9Y282 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms