Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDZRN3Q9UPQ7 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDZRN3Q9UPQ7 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDZRN3Q9UPQ7 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDZRN3Q9UPQ7 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PDZRN3Q9UPQ7 SLC9A3P2-201ENST00000447821 2021 ntBASIC20.75■□□□□ 0.91
PDZRN3Q9UPQ7 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC20.75■□□□□ 0.91
PDZRN3Q9UPQ7 AC007541.1-201ENST00000570282 1469 ntBASIC20.75■□□□□ 0.91
PDZRN3Q9UPQ7 GPAA1P2-202ENST00000606848 1787 ntBASIC20.74■□□□□ 0.91
PDZRN3Q9UPQ7 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
PDZRN3Q9UPQ7 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDZRN3Q9UPQ7 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDZRN3Q9UPQ7 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDZRN3Q9UPQ7 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDZRN3Q9UPQ7 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
PDZRN3Q9UPQ7 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
PDZRN3Q9UPQ7 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC20.74■□□□□ 0.91
PDZRN3Q9UPQ7 AL603832.2-201ENST00000566195 2125 ntBASIC20.74■□□□□ 0.91
PDZRN3Q9UPQ7 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC20.74■□□□□ 0.91
PDZRN3Q9UPQ7 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDZRN3Q9UPQ7 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDZRN3Q9UPQ7 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
PDZRN3Q9UPQ7 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDZRN3Q9UPQ7 AC087499.6-201ENST00000411576 835 ntBASIC20.74■□□□□ 0.91
PDZRN3Q9UPQ7 DFFBP1-201ENST00000433250 979 ntBASIC20.74■□□□□ 0.91
PDZRN3Q9UPQ7 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC20.74■□□□□ 0.91
PDZRN3Q9UPQ7 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDZRN3Q9UPQ7 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PDZRN3Q9UPQ7 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC20.74■□□□□ 0.91
PDZRN3Q9UPQ7 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC20.74■□□□□ 0.91
PDZRN3Q9UPQ7 AL844908.2-201ENST00000609461 460 ntBASIC20.74■□□□□ 0.91
PDZRN3Q9UPQ7 AC008738.7-201ENST00000609744 511 ntBASIC20.74■□□□□ 0.91
PDZRN3Q9UPQ7 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC20.74■□□□□ 0.91
PDZRN3Q9UPQ7 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC20.74■□□□□ 0.91
PDZRN3Q9UPQ7 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
PDZRN3Q9UPQ7 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDZRN3Q9UPQ7 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDZRN3Q9UPQ7 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDZRN3Q9UPQ7 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDZRN3Q9UPQ7 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC20.74■□□□□ 0.91
PDZRN3Q9UPQ7 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDZRN3Q9UPQ7 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC20.74■□□□□ 0.91
PDZRN3Q9UPQ7 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC20.74■□□□□ 0.91
PDZRN3Q9UPQ7 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDZRN3Q9UPQ7 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC20.74■□□□□ 0.91
PDZRN3Q9UPQ7 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDZRN3Q9UPQ7 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC20.73■□□□□ 0.91
PDZRN3Q9UPQ7 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
PDZRN3Q9UPQ7 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDZRN3Q9UPQ7 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDZRN3Q9UPQ7 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDZRN3Q9UPQ7 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDZRN3Q9UPQ7 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDZRN3Q9UPQ7 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC20.73■□□□□ 0.91
PDZRN3Q9UPQ7 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PDZRN3Q9UPQ7 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDZRN3Q9UPQ7 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDZRN3Q9UPQ7 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDZRN3Q9UPQ7 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC20.73■□□□□ 0.91
PDZRN3Q9UPQ7 GIMAP3P-201ENST00000495150 836 ntBASIC20.73■□□□□ 0.91
PDZRN3Q9UPQ7 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC20.73■□□□□ 0.91
PDZRN3Q9UPQ7 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
PDZRN3Q9UPQ7 STOM-203ENST00000538954 1257 ntTSL 5 BASIC20.73■□□□□ 0.91
PDZRN3Q9UPQ7 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PDZRN3Q9UPQ7 IFT20-216ENST00000588477 774 ntTSL 5 BASIC20.73■□□□□ 0.91
PDZRN3Q9UPQ7 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
PDZRN3Q9UPQ7 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDZRN3Q9UPQ7 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDZRN3Q9UPQ7 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PDZRN3Q9UPQ7 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC20.73■□□□□ 0.91
PDZRN3Q9UPQ7 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC20.73■□□□□ 0.91
PDZRN3Q9UPQ7 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDZRN3Q9UPQ7 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC20.73■□□□□ 0.91
PDZRN3Q9UPQ7 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC20.73■□□□□ 0.91
PDZRN3Q9UPQ7 AC010491.1-201ENST00000563101 2797 ntBASIC20.73■□□□□ 0.91
PDZRN3Q9UPQ7 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PDZRN3Q9UPQ7 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC20.73■□□□□ 0.91
PDZRN3Q9UPQ7 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC20.73■□□□□ 0.91
PDZRN3Q9UPQ7 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
PDZRN3Q9UPQ7 AC006449.6-201ENST00000612330 2296 ntBASIC20.73■□□□□ 0.91
PDZRN3Q9UPQ7 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDZRN3Q9UPQ7 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
PDZRN3Q9UPQ7 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PDZRN3Q9UPQ7 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC20.72■□□□□ 0.91
PDZRN3Q9UPQ7 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDZRN3Q9UPQ7 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDZRN3Q9UPQ7 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PDZRN3Q9UPQ7 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
PDZRN3Q9UPQ7 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDZRN3Q9UPQ7 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PDZRN3Q9UPQ7 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC20.72■□□□□ 0.91
PDZRN3Q9UPQ7 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC20.72■□□□□ 0.91
PDZRN3Q9UPQ7 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDZRN3Q9UPQ7 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC20.72■□□□□ 0.91
PDZRN3Q9UPQ7 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC20.72■□□□□ 0.91
PDZRN3Q9UPQ7 PRYP6-201ENST00000514804 343 ntBASIC20.72■□□□□ 0.91
PDZRN3Q9UPQ7 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PDZRN3Q9UPQ7 AC106886.1-201ENST00000568660 600 ntBASIC20.72■□□□□ 0.91
PDZRN3Q9UPQ7 AL162274.1-201ENST00000617191 1098 ntBASIC20.72■□□□□ 0.91
PDZRN3Q9UPQ7 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms