Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 FXR1-221ENST00000491674 365 ntTSL 2 BASIC19.55■□□□□ 0.72
ECHDC1Q9NTX5 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC19.55■□□□□ 0.72
ECHDC1Q9NTX5 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC19.55■□□□□ 0.72
ECHDC1Q9NTX5 PRR29-209ENST00000582540 967 ntTSL 2 BASIC19.55■□□□□ 0.72
ECHDC1Q9NTX5 AL138828.2-201ENST00000615812 383 ntBASIC19.55■□□□□ 0.72
ECHDC1Q9NTX5 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
ECHDC1Q9NTX5 AC073592.8-201ENST00000624126 511 ntBASIC19.55■□□□□ 0.72
ECHDC1Q9NTX5 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
ECHDC1Q9NTX5 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC19.55■□□□□ 0.72
ECHDC1Q9NTX5 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ECHDC1Q9NTX5 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ECHDC1Q9NTX5 FO538757.1-201ENST00000623083 1397 ntBASIC19.55■□□□□ 0.72
ECHDC1Q9NTX5 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
ECHDC1Q9NTX5 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
ECHDC1Q9NTX5 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC19.55■□□□□ 0.72
ECHDC1Q9NTX5 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ECHDC1Q9NTX5 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
ECHDC1Q9NTX5 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
ECHDC1Q9NTX5 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
ECHDC1Q9NTX5 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ECHDC1Q9NTX5 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ECHDC1Q9NTX5 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ECHDC1Q9NTX5 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ECHDC1Q9NTX5 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ECHDC1Q9NTX5 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC19.54■□□□□ 0.72
ECHDC1Q9NTX5 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
ECHDC1Q9NTX5 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ECHDC1Q9NTX5 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ECHDC1Q9NTX5 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ECHDC1Q9NTX5 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ECHDC1Q9NTX5 PNMT-202ENST00000394246 821 ntTSL 2 BASIC19.54■□□□□ 0.72
ECHDC1Q9NTX5 FO393414.2-201ENST00000405153 598 ntBASIC19.54■□□□□ 0.72
ECHDC1Q9NTX5 AZGP1P1-201ENST00000411909 902 ntBASIC19.54■□□□□ 0.72
ECHDC1Q9NTX5 AC092580.3-201ENST00000430932 139 ntBASIC19.54■□□□□ 0.72
ECHDC1Q9NTX5 SUOX-214ENST00000551841 906 ntTSL 3 BASIC19.54■□□□□ 0.72
ECHDC1Q9NTX5 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC19.54■□□□□ 0.72
ECHDC1Q9NTX5 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC19.54■□□□□ 0.72
ECHDC1Q9NTX5 AC106028.4-201ENST00000614509 607 ntBASIC19.54■□□□□ 0.72
ECHDC1Q9NTX5 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC19.54■□□□□ 0.72
ECHDC1Q9NTX5 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ECHDC1Q9NTX5 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC19.54■□□□□ 0.72
ECHDC1Q9NTX5 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
ECHDC1Q9NTX5 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC19.54■□□□□ 0.72
ECHDC1Q9NTX5 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
ECHDC1Q9NTX5 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
ECHDC1Q9NTX5 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
ECHDC1Q9NTX5 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
ECHDC1Q9NTX5 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
ECHDC1Q9NTX5 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ECHDC1Q9NTX5 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
ECHDC1Q9NTX5 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
ECHDC1Q9NTX5 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC19.54■□□□□ 0.72
ECHDC1Q9NTX5 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ECHDC1Q9NTX5 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
ECHDC1Q9NTX5 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC19.53■□□□□ 0.72
ECHDC1Q9NTX5 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC19.53■□□□□ 0.72
ECHDC1Q9NTX5 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ECHDC1Q9NTX5 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ECHDC1Q9NTX5 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ECHDC1Q9NTX5 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ECHDC1Q9NTX5 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ECHDC1Q9NTX5 KLK8-202ENST00000320838 456 ntTSL 5 BASIC19.53■□□□□ 0.72
ECHDC1Q9NTX5 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
ECHDC1Q9NTX5 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ECHDC1Q9NTX5 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC19.53■□□□□ 0.72
ECHDC1Q9NTX5 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
ECHDC1Q9NTX5 MIR943-201ENST00000401286 94 ntBASIC19.53■□□□□ 0.72
ECHDC1Q9NTX5 TREML5P-201ENST00000421694 576 ntBASIC19.53■□□□□ 0.72
ECHDC1Q9NTX5 PHKG1P2-201ENST00000457537 863 ntBASIC19.53■□□□□ 0.72
ECHDC1Q9NTX5 RFPL4AP1-201ENST00000530883 850 ntBASIC19.53■□□□□ 0.72
ECHDC1Q9NTX5 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
ECHDC1Q9NTX5 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC19.53■□□□□ 0.72
ECHDC1Q9NTX5 SPIB-207ENST00000597855 564 ntTSL 4 BASIC19.53■□□□□ 0.72
ECHDC1Q9NTX5 AL450472.2-201ENST00000603663 1156 ntBASIC19.53■□□□□ 0.72
ECHDC1Q9NTX5 AL158211.3-201ENST00000607385 239 ntBASIC19.53■□□□□ 0.72
ECHDC1Q9NTX5 TEX28P1-201ENST00000613479 1221 ntBASIC19.53■□□□□ 0.72
ECHDC1Q9NTX5 TEX28P2-201ENST00000617764 1221 ntBASIC19.53■□□□□ 0.72
ECHDC1Q9NTX5 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC19.53■□□□□ 0.72
ECHDC1Q9NTX5 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ECHDC1Q9NTX5 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ECHDC1Q9NTX5 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ECHDC1Q9NTX5 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ECHDC1Q9NTX5 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ECHDC1Q9NTX5 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC19.53■□□□□ 0.72
ECHDC1Q9NTX5 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
ECHDC1Q9NTX5 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.72
ECHDC1Q9NTX5 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC19.52■□□□□ 0.72
ECHDC1Q9NTX5 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
ECHDC1Q9NTX5 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ECHDC1Q9NTX5 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
ECHDC1Q9NTX5 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC19.52■□□□□ 0.72
ECHDC1Q9NTX5 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ECHDC1Q9NTX5 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ECHDC1Q9NTX5 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ECHDC1Q9NTX5 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
ECHDC1Q9NTX5 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ECHDC1Q9NTX5 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ECHDC1Q9NTX5 AC097493.3-201ENST00000509725 367 ntBASIC19.52■□□□□ 0.72
ECHDC1Q9NTX5 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ECHDC1Q9NTX5 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms