Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SALL1Q9NSC2 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC19.26■□□□□ 0.67
SALL1Q9NSC2 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
SALL1Q9NSC2 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SALL1Q9NSC2 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
SALL1Q9NSC2 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SALL1Q9NSC2 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SALL1Q9NSC2 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SALL1Q9NSC2 LINC02199-201ENST00000506655 2702 ntBASIC19.26■□□□□ 0.67
SALL1Q9NSC2 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SALL1Q9NSC2 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SALL1Q9NSC2 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SALL1Q9NSC2 OR8S1-201ENST00000310194 1080 ntBASIC19.25■□□□□ 0.67
SALL1Q9NSC2 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SALL1Q9NSC2 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
SALL1Q9NSC2 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SALL1Q9NSC2 AC136604.1-201ENST00000418535 575 ntBASIC19.25■□□□□ 0.67
SALL1Q9NSC2 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC19.25■□□□□ 0.67
SALL1Q9NSC2 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC19.25■□□□□ 0.67
SALL1Q9NSC2 AC011495.1-201ENST00000498085 584 ntBASIC19.25■□□□□ 0.67
SALL1Q9NSC2 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC19.25■□□□□ 0.67
SALL1Q9NSC2 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SALL1Q9NSC2 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC19.25■□□□□ 0.67
SALL1Q9NSC2 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC19.25■□□□□ 0.67
SALL1Q9NSC2 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
SALL1Q9NSC2 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SALL1Q9NSC2 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SALL1Q9NSC2 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SALL1Q9NSC2 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SALL1Q9NSC2 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SALL1Q9NSC2 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
SALL1Q9NSC2 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC19.25■□□□□ 0.67
SALL1Q9NSC2 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SALL1Q9NSC2 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC19.25■□□□□ 0.67
SALL1Q9NSC2 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC19.25■□□□□ 0.67
SALL1Q9NSC2 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SALL1Q9NSC2 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC19.25■□□□□ 0.67
SALL1Q9NSC2 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SALL1Q9NSC2 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SALL1Q9NSC2 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SALL1Q9NSC2 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SALL1Q9NSC2 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC19.25■□□□□ 0.67
SALL1Q9NSC2 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC19.25■□□□□ 0.67
SALL1Q9NSC2 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
SALL1Q9NSC2 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
SALL1Q9NSC2 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SALL1Q9NSC2 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SALL1Q9NSC2 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
SALL1Q9NSC2 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SALL1Q9NSC2 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
SALL1Q9NSC2 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC19.25■□□□□ 0.67
SALL1Q9NSC2 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC19.25■□□□□ 0.67
SALL1Q9NSC2 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC19.25■□□□□ 0.67
SALL1Q9NSC2 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC19.25■□□□□ 0.67
SALL1Q9NSC2 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC19.25■□□□□ 0.67
SALL1Q9NSC2 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SALL1Q9NSC2 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SALL1Q9NSC2 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC19.24■□□□□ 0.67
SALL1Q9NSC2 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC19.24■□□□□ 0.67
SALL1Q9NSC2 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
SALL1Q9NSC2 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SALL1Q9NSC2 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC19.24■□□□□ 0.67
SALL1Q9NSC2 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SALL1Q9NSC2 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC19.24■□□□□ 0.67
SALL1Q9NSC2 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC19.24■□□□□ 0.67
SALL1Q9NSC2 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SALL1Q9NSC2 AC134407.2-201ENST00000625089 1978 ntBASIC19.24■□□□□ 0.67
SALL1Q9NSC2 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC19.24■□□□□ 0.67
SALL1Q9NSC2 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SALL1Q9NSC2 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
SALL1Q9NSC2 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SALL1Q9NSC2 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SALL1Q9NSC2 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SALL1Q9NSC2 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SALL1Q9NSC2 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SALL1Q9NSC2 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SALL1Q9NSC2 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SALL1Q9NSC2 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SALL1Q9NSC2 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SALL1Q9NSC2 TOMM22P5-201ENST00000416399 439 ntBASIC19.24■□□□□ 0.67
SALL1Q9NSC2 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SALL1Q9NSC2 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC19.24■□□□□ 0.67
SALL1Q9NSC2 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC19.24■□□□□ 0.67
SALL1Q9NSC2 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SALL1Q9NSC2 PHKG1P2-201ENST00000457537 863 ntBASIC19.24■□□□□ 0.67
SALL1Q9NSC2 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC19.24■□□□□ 0.67
SALL1Q9NSC2 HNRNPUP1-201ENST00000554987 333 ntBASIC19.24■□□□□ 0.67
SALL1Q9NSC2 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC19.24■□□□□ 0.67
SALL1Q9NSC2 MIR8072-201ENST00000614241 80 ntBASIC19.24■□□□□ 0.67
SALL1Q9NSC2 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC19.24■□□□□ 0.67
SALL1Q9NSC2 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC19.24■□□□□ 0.67
SALL1Q9NSC2 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC19.24■□□□□ 0.67
SALL1Q9NSC2 AC022188.1-201ENST00000620960 1664 ntBASIC19.23■□□□□ 0.67
SALL1Q9NSC2 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.23■□□□□ 0.67
SALL1Q9NSC2 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SALL1Q9NSC2 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
SALL1Q9NSC2 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SALL1Q9NSC2 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SALL1Q9NSC2 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SALL1Q9NSC2 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms