Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 CU639417.3-201ENST00000624240 1404 ntBASIC14.23□□□□□ -0.13
KIAA1549Q9HCM3 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
KIAA1549Q9HCM3 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
KIAA1549Q9HCM3 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
KIAA1549Q9HCM3 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
KIAA1549Q9HCM3 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
KIAA1549Q9HCM3 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
KIAA1549Q9HCM3 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
KIAA1549Q9HCM3 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KIAA1549Q9HCM3 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
KIAA1549Q9HCM3 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC14.22□□□□□ -0.13
KIAA1549Q9HCM3 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
KIAA1549Q9HCM3 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KIAA1549Q9HCM3 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.22□□□□□ -0.13
KIAA1549Q9HCM3 AC079776.1-201ENST00000401540 1152 ntBASIC14.22□□□□□ -0.13
KIAA1549Q9HCM3 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
KIAA1549Q9HCM3 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
KIAA1549Q9HCM3 AC136604.1-201ENST00000418535 575 ntBASIC14.22□□□□□ -0.13
KIAA1549Q9HCM3 DFFBP1-201ENST00000433250 979 ntBASIC14.22□□□□□ -0.13
KIAA1549Q9HCM3 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.22□□□□□ -0.13
KIAA1549Q9HCM3 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.22□□□□□ -0.13
KIAA1549Q9HCM3 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.22□□□□□ -0.13
KIAA1549Q9HCM3 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.22□□□□□ -0.13
KIAA1549Q9HCM3 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.22□□□□□ -0.13
KIAA1549Q9HCM3 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.22□□□□□ -0.13
KIAA1549Q9HCM3 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KIAA1549Q9HCM3 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KIAA1549Q9HCM3 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KIAA1549Q9HCM3 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
KIAA1549Q9HCM3 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
KIAA1549Q9HCM3 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.22□□□□□ -0.13
KIAA1549Q9HCM3 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
KIAA1549Q9HCM3 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
KIAA1549Q9HCM3 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
KIAA1549Q9HCM3 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KIAA1549Q9HCM3 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.22□□□□□ -0.13
KIAA1549Q9HCM3 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
KIAA1549Q9HCM3 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
KIAA1549Q9HCM3 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.22□□□□□ -0.13
KIAA1549Q9HCM3 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.22□□□□□ -0.13
KIAA1549Q9HCM3 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KIAA1549Q9HCM3 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
KIAA1549Q9HCM3 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
KIAA1549Q9HCM3 TOMM22P5-201ENST00000416399 439 ntBASIC14.22□□□□□ -0.13
KIAA1549Q9HCM3 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
KIAA1549Q9HCM3 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KIAA1549Q9HCM3 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.22□□□□□ -0.13
KIAA1549Q9HCM3 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14.22□□□□□ -0.13
KIAA1549Q9HCM3 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.22□□□□□ -0.13
KIAA1549Q9HCM3 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.22□□□□□ -0.13
KIAA1549Q9HCM3 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.21□□□□□ -0.13
KIAA1549Q9HCM3 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
KIAA1549Q9HCM3 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
KIAA1549Q9HCM3 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
KIAA1549Q9HCM3 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
KIAA1549Q9HCM3 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
KIAA1549Q9HCM3 CLK3P2-201ENST00000427566 1453 ntBASIC14.21□□□□□ -0.13
KIAA1549Q9HCM3 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
KIAA1549Q9HCM3 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC14.21□□□□□ -0.13
KIAA1549Q9HCM3 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.21□□□□□ -0.13
KIAA1549Q9HCM3 REXO1L1P-202ENST00000608646 1974 ntBASIC14.21□□□□□ -0.13
KIAA1549Q9HCM3 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
KIAA1549Q9HCM3 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC14.21□□□□□ -0.13
KIAA1549Q9HCM3 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
KIAA1549Q9HCM3 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
KIAA1549Q9HCM3 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
KIAA1549Q9HCM3 OR8S1-201ENST00000310194 1080 ntBASIC14.21□□□□□ -0.13
KIAA1549Q9HCM3 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
KIAA1549Q9HCM3 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.21□□□□□ -0.13
KIAA1549Q9HCM3 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.21□□□□□ -0.13
KIAA1549Q9HCM3 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
KIAA1549Q9HCM3 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.21□□□□□ -0.13
KIAA1549Q9HCM3 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.21□□□□□ -0.13
KIAA1549Q9HCM3 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.21□□□□□ -0.13
KIAA1549Q9HCM3 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.21□□□□□ -0.13
KIAA1549Q9HCM3 AC093004.1-201ENST00000508850 424 ntBASIC14.21□□□□□ -0.13
KIAA1549Q9HCM3 DOC2GP-202ENST00000514950 1163 ntBASIC14.21□□□□□ -0.13
KIAA1549Q9HCM3 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.21□□□□□ -0.13
KIAA1549Q9HCM3 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
KIAA1549Q9HCM3 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.21□□□□□ -0.13
KIAA1549Q9HCM3 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.21□□□□□ -0.13
KIAA1549Q9HCM3 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.21□□□□□ -0.13
KIAA1549Q9HCM3 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.21□□□□□ -0.13
KIAA1549Q9HCM3 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.21□□□□□ -0.13
KIAA1549Q9HCM3 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.21□□□□□ -0.13
KIAA1549Q9HCM3 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
KIAA1549Q9HCM3 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
KIAA1549Q9HCM3 AC009090.5-201ENST00000624886 2285 ntBASIC14.21□□□□□ -0.13
KIAA1549Q9HCM3 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
KIAA1549Q9HCM3 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.21□□□□□ -0.14
KIAA1549Q9HCM3 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.21□□□□□ -0.14
KIAA1549Q9HCM3 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.21□□□□□ -0.14
KIAA1549Q9HCM3 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
KIAA1549Q9HCM3 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
KIAA1549Q9HCM3 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.2□□□□□ -0.14
KIAA1549Q9HCM3 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
KIAA1549Q9HCM3 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
KIAA1549Q9HCM3 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
KIAA1549Q9HCM3 AL353779.1-201ENST00000434793 351 ntBASIC14.2□□□□□ -0.14
KIAA1549Q9HCM3 U91328.1-201ENST00000437528 223 ntBASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms