Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 MXI1-205ENST00000393134 889 ntTSL 2 BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 GRAP-202ENST00000395635 834 ntTSL 2 BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 METTL26-204ENST00000397665 558 ntTSL 2 BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 PTPA-220ENST00000436883 532 ntTSL 4 BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 GAPDHP21-201ENST00000450301 1010 ntBASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 INE1-201ENST00000456273 945 ntBASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 CD81-207ENST00000481687 890 ntTSL 2 BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 AP002490.2-201ENST00000524791 560 ntBASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 HILS1-202ENST00000545329 423 ntBASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 COX11-202ENST00000571584 1108 ntTSL 2 BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 SRD5A3P1-201ENST00000603021 949 ntBASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 AC108359.1-201ENST00000616451 1211 ntBASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 TMEM14EP-202ENST00000639378 1296 ntBASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 CDC14C-201ENST00000428251 1719 ntBASIC5.45□□□□□ -1.54
KRTAP4-3Q9BYR4 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC5.45□□□□□ -1.54
KRTAP4-3Q9BYR4 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC5.45□□□□□ -1.54
KRTAP4-3Q9BYR4 AC138969.3-201ENST00000546612 1459 ntBASIC5.45□□□□□ -1.54
KRTAP4-3Q9BYR4 AC138932.2-201ENST00000548268 1459 ntBASIC5.45□□□□□ -1.54
KRTAP4-3Q9BYR4 AC126755.4-201ENST00000549796 1459 ntBASIC5.45□□□□□ -1.54
KRTAP4-3Q9BYR4 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
KRTAP4-3Q9BYR4 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
KRTAP4-3Q9BYR4 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
KRTAP4-3Q9BYR4 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
KRTAP4-3Q9BYR4 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
KRTAP4-3Q9BYR4 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
KRTAP4-3Q9BYR4 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC5.45□□□□□ -1.54
KRTAP4-3Q9BYR4 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
KRTAP4-3Q9BYR4 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
KRTAP4-3Q9BYR4 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC5.45□□□□□ -1.54
KRTAP4-3Q9BYR4 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
KRTAP4-3Q9BYR4 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC5.45□□□□□ -1.54
KRTAP4-3Q9BYR4 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms