Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PHOX2BQ99453 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PHOX2BQ99453 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PHOX2BQ99453 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PHOX2BQ99453 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PHOX2BQ99453 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC16.3■□□□□ 0.2
PHOX2BQ99453 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
PHOX2BQ99453 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PHOX2BQ99453 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.3■□□□□ 0.2
PHOX2BQ99453 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.3■□□□□ 0.2
PHOX2BQ99453 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.3■□□□□ 0.2
PHOX2BQ99453 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PHOX2BQ99453 FNTAP2-201ENST00000430308 634 ntBASIC16.3■□□□□ 0.2
PHOX2BQ99453 OLR1-203ENST00000432556 950 ntTSL 2 BASIC16.3■□□□□ 0.2
PHOX2BQ99453 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC16.3■□□□□ 0.2
PHOX2BQ99453 CHMP4BP1-201ENST00000556017 588 ntBASIC16.3■□□□□ 0.2
PHOX2BQ99453 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.3■□□□□ 0.2
PHOX2BQ99453 RRP7BP-205ENST00000566851 833 ntBASIC16.3■□□□□ 0.2
PHOX2BQ99453 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC16.3■□□□□ 0.2
PHOX2BQ99453 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PHOX2BQ99453 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC16.3■□□□□ 0.2
PHOX2BQ99453 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.3■□□□□ 0.2
PHOX2BQ99453 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.3■□□□□ 0.2
PHOX2BQ99453 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC16.3■□□□□ 0.2
PHOX2BQ99453 AC092723.2-201ENST00000624955 793 ntBASIC16.3■□□□□ 0.2
PHOX2BQ99453 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.3■□□□□ 0.2
PHOX2BQ99453 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.3■□□□□ 0.2
PHOX2BQ99453 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PHOX2BQ99453 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PHOX2BQ99453 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PHOX2BQ99453 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PHOX2BQ99453 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PHOX2BQ99453 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PHOX2BQ99453 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.3■□□□□ 0.2
PHOX2BQ99453 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
PHOX2BQ99453 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PHOX2BQ99453 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.3■□□□□ 0.2
PHOX2BQ99453 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PHOX2BQ99453 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.29■□□□□ 0.2
PHOX2BQ99453 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHOX2BQ99453 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.29■□□□□ 0.2
PHOX2BQ99453 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
PHOX2BQ99453 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PHOX2BQ99453 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.29■□□□□ 0.2
PHOX2BQ99453 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC16.29■□□□□ 0.2
PHOX2BQ99453 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PHOX2BQ99453 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHOX2BQ99453 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHOX2BQ99453 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHOX2BQ99453 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
PHOX2BQ99453 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHOX2BQ99453 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PHOX2BQ99453 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC16.29■□□□□ 0.2
PHOX2BQ99453 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC16.29■□□□□ 0.2
PHOX2BQ99453 SERBP1P3-201ENST00000459980 809 ntBASIC16.29■□□□□ 0.2
PHOX2BQ99453 AC104596.2-201ENST00000512793 793 ntBASIC16.29■□□□□ 0.2
PHOX2BQ99453 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PHOX2BQ99453 FAM86HP-204ENST00000513466 959 ntBASIC16.29■□□□□ 0.2
PHOX2BQ99453 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
PHOX2BQ99453 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC16.29■□□□□ 0.2
PHOX2BQ99453 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PHOX2BQ99453 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHOX2BQ99453 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC16.29■□□□□ 0.2
PHOX2BQ99453 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC16.29■□□□□ 0.2
PHOX2BQ99453 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
PHOX2BQ99453 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC16.29■□□□□ 0.2
PHOX2BQ99453 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.29■□□□□ 0.2
PHOX2BQ99453 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHOX2BQ99453 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.29■□□□□ 0.2
PHOX2BQ99453 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PHOX2BQ99453 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PHOX2BQ99453 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.29■□□□□ 0.2
PHOX2BQ99453 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.29■□□□□ 0.2
PHOX2BQ99453 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.29■□□□□ 0.2
PHOX2BQ99453 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PHOX2BQ99453 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHOX2BQ99453 REXO1L11P-201ENST00000620964 1927 ntBASIC16.29■□□□□ 0.2
PHOX2BQ99453 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHOX2BQ99453 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
PHOX2BQ99453 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHOX2BQ99453 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.29■□□□□ 0.2
PHOX2BQ99453 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PHOX2BQ99453 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.29■□□□□ 0.2
PHOX2BQ99453 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PHOX2BQ99453 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PHOX2BQ99453 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PHOX2BQ99453 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PHOX2BQ99453 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.28■□□□□ 0.2
PHOX2BQ99453 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PHOX2BQ99453 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PHOX2BQ99453 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PHOX2BQ99453 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
PHOX2BQ99453 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PHOX2BQ99453 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PHOX2BQ99453 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC16.28■□□□□ 0.2
PHOX2BQ99453 ACTG1P3-201ENST00000431775 1114 ntBASIC16.28■□□□□ 0.2
PHOX2BQ99453 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PHOX2BQ99453 HIST2H2BC-201ENST00000498492 580 ntBASIC16.28■□□□□ 0.2
PHOX2BQ99453 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC16.28■□□□□ 0.2
PHOX2BQ99453 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms