Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
RNF183Q96D59 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RNF183Q96D59 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
RNF183Q96D59 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RNF183Q96D59 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RNF183Q96D59 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RNF183Q96D59 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC12.03□□□□□ -0.48
RNF183Q96D59 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
RNF183Q96D59 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC12.03□□□□□ -0.48
RNF183Q96D59 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC12.03□□□□□ -0.48
RNF183Q96D59 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC12.03□□□□□ -0.48
RNF183Q96D59 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RNF183Q96D59 AL138918.1-201ENST00000568306 659 ntBASIC12.03□□□□□ -0.48
RNF183Q96D59 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC12.03□□□□□ -0.48
RNF183Q96D59 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC12.03□□□□□ -0.48
RNF183Q96D59 AC011467.4-201ENST00000594891 528 ntBASIC12.03□□□□□ -0.48
RNF183Q96D59 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC12.03□□□□□ -0.48
RNF183Q96D59 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
RNF183Q96D59 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC12.03□□□□□ -0.48
RNF183Q96D59 RAB34-224ENST00000636513 888 ntTSL 5 BASIC12.03□□□□□ -0.48
RNF183Q96D59 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RNF183Q96D59 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC12.03□□□□□ -0.48
RNF183Q96D59 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RNF183Q96D59 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RNF183Q96D59 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RNF183Q96D59 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC12.03□□□□□ -0.48
RNF183Q96D59 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RNF183Q96D59 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
RNF183Q96D59 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC12.03□□□□□ -0.48
RNF183Q96D59 TUBB3P1-201ENST00000405796 1332 ntBASIC12.03□□□□□ -0.48
RNF183Q96D59 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RNF183Q96D59 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RNF183Q96D59 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC12.03□□□□□ -0.48
RNF183Q96D59 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC12.03□□□□□ -0.48
RNF183Q96D59 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC12.03□□□□□ -0.48
RNF183Q96D59 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC12.03□□□□□ -0.48
RNF183Q96D59 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RNF183Q96D59 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC12.03□□□□□ -0.48
RNF183Q96D59 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC12.03□□□□□ -0.48
RNF183Q96D59 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
RNF183Q96D59 AL671710.1-201ENST00000610245 2349 ntBASIC12.03□□□□□ -0.48
RNF183Q96D59 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
RNF183Q96D59 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RNF183Q96D59 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
RNF183Q96D59 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
RNF183Q96D59 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
RNF183Q96D59 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
RNF183Q96D59 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
RNF183Q96D59 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
RNF183Q96D59 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
RNF183Q96D59 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
RNF183Q96D59 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
RNF183Q96D59 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RNF183Q96D59 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC12.02□□□□□ -0.49
RNF183Q96D59 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RNF183Q96D59 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC12.02□□□□□ -0.49
RNF183Q96D59 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
RNF183Q96D59 PP14571-201ENST00000404327 934 ntTSL 2 BASIC12.02□□□□□ -0.49
RNF183Q96D59 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC12.02□□□□□ -0.49
RNF183Q96D59 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC12.02□□□□□ -0.49
RNF183Q96D59 SPDYE14P-201ENST00000442619 822 ntBASIC12.02□□□□□ -0.49
RNF183Q96D59 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC12.02□□□□□ -0.49
RNF183Q96D59 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
RNF183Q96D59 PRYP6-201ENST00000514804 343 ntBASIC12.02□□□□□ -0.49
RNF183Q96D59 GATD1-206ENST00000526325 756 ntTSL 5 BASIC12.02□□□□□ -0.49
RNF183Q96D59 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC12.02□□□□□ -0.49
RNF183Q96D59 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC12.02□□□□□ -0.49
RNF183Q96D59 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC12.02□□□□□ -0.49
RNF183Q96D59 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC12.02□□□□□ -0.49
RNF183Q96D59 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RNF183Q96D59 AC073389.1-201ENST00000595595 795 ntBASIC12.02□□□□□ -0.49
RNF183Q96D59 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC12.02□□□□□ -0.49
RNF183Q96D59 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC12.02□□□□□ -0.49
RNF183Q96D59 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
RNF183Q96D59 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
RNF183Q96D59 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
RNF183Q96D59 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
RNF183Q96D59 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
RNF183Q96D59 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
RNF183Q96D59 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
RNF183Q96D59 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
RNF183Q96D59 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC12.02□□□□□ -0.49
RNF183Q96D59 PC-204ENST00000524491 1714 ntTSL 2 BASIC12.02□□□□□ -0.49
RNF183Q96D59 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
RNF183Q96D59 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RNF183Q96D59 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RNF183Q96D59 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RNF183Q96D59 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RNF183Q96D59 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RNF183Q96D59 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RNF183Q96D59 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
RNF183Q96D59 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC12.02□□□□□ -0.49
RNF183Q96D59 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RNF183Q96D59 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RNF183Q96D59 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
RNF183Q96D59 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
RNF183Q96D59 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC12.02□□□□□ -0.49
RNF183Q96D59 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
RNF183Q96D59 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
RNF183Q96D59 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC12.01□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms