Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXRED1Q96CU9 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXRED1Q96CU9 AL031284.1-201ENST00000419297 478 ntBASIC14.09□□□□□ -0.15
FOXRED1Q96CU9 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC14.09□□□□□ -0.15
FOXRED1Q96CU9 FDX1P1-201ENST00000449115 551 ntBASIC14.09□□□□□ -0.15
FOXRED1Q96CU9 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
FOXRED1Q96CU9 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXRED1Q96CU9 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14.09□□□□□ -0.15
FOXRED1Q96CU9 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC14.09□□□□□ -0.15
FOXRED1Q96CU9 PAM16-208ENST00000573553 722 ntTSL 2 BASIC14.09□□□□□ -0.15
FOXRED1Q96CU9 AC025062.2-201ENST00000605477 670 ntBASIC14.09□□□□□ -0.15
FOXRED1Q96CU9 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.09□□□□□ -0.15
FOXRED1Q96CU9 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.09□□□□□ -0.15
FOXRED1Q96CU9 AC107918.4-202ENST00000641623 219 ntBASIC14.09□□□□□ -0.15
FOXRED1Q96CU9 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXRED1Q96CU9 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
FOXRED1Q96CU9 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXRED1Q96CU9 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
FOXRED1Q96CU9 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.09□□□□□ -0.15
FOXRED1Q96CU9 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.09□□□□□ -0.15
FOXRED1Q96CU9 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
FOXRED1Q96CU9 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXRED1Q96CU9 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXRED1Q96CU9 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXRED1Q96CU9 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
FOXRED1Q96CU9 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXRED1Q96CU9 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXRED1Q96CU9 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXRED1Q96CU9 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
FOXRED1Q96CU9 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXRED1Q96CU9 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
FOXRED1Q96CU9 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
FOXRED1Q96CU9 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
FOXRED1Q96CU9 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
FOXRED1Q96CU9 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
FOXRED1Q96CU9 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.08□□□□□ -0.15
FOXRED1Q96CU9 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.08□□□□□ -0.16
FOXRED1Q96CU9 PPT1-215ENST00000641471 2368 ntBASIC14.08□□□□□ -0.16
FOXRED1Q96CU9 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.08□□□□□ -0.16
FOXRED1Q96CU9 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FOXRED1Q96CU9 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.08□□□□□ -0.16
FOXRED1Q96CU9 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
FOXRED1Q96CU9 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.08□□□□□ -0.16
FOXRED1Q96CU9 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
FOXRED1Q96CU9 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14.08□□□□□ -0.16
FOXRED1Q96CU9 MIR3909-201ENST00000579518 119 ntBASIC14.08□□□□□ -0.16
FOXRED1Q96CU9 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
FOXRED1Q96CU9 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.08□□□□□ -0.16
FOXRED1Q96CU9 MIR1199-201ENST00000621445 119 ntBASIC14.08□□□□□ -0.16
FOXRED1Q96CU9 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
FOXRED1Q96CU9 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FOXRED1Q96CU9 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FOXRED1Q96CU9 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FOXRED1Q96CU9 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.08□□□□□ -0.16
FOXRED1Q96CU9 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.08□□□□□ -0.16
FOXRED1Q96CU9 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FOXRED1Q96CU9 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
FOXRED1Q96CU9 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.08□□□□□ -0.16
FOXRED1Q96CU9 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FOXRED1Q96CU9 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
FOXRED1Q96CU9 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FOXRED1Q96CU9 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
FOXRED1Q96CU9 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
FOXRED1Q96CU9 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FOXRED1Q96CU9 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FOXRED1Q96CU9 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
FOXRED1Q96CU9 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
FOXRED1Q96CU9 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
FOXRED1Q96CU9 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
FOXRED1Q96CU9 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
FOXRED1Q96CU9 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FOXRED1Q96CU9 SSR4P1-203ENST00000599569 2260 ntBASIC14.07□□□□□ -0.16
FOXRED1Q96CU9 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
FOXRED1Q96CU9 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FOXRED1Q96CU9 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
FOXRED1Q96CU9 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FOXRED1Q96CU9 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
FOXRED1Q96CU9 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.07□□□□□ -0.16
FOXRED1Q96CU9 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.07□□□□□ -0.16
FOXRED1Q96CU9 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.07□□□□□ -0.16
FOXRED1Q96CU9 MRPL3P1-201ENST00000400109 1033 ntBASIC14.07□□□□□ -0.16
FOXRED1Q96CU9 AC245100.5-201ENST00000452108 331 ntBASIC14.07□□□□□ -0.16
FOXRED1Q96CU9 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.07□□□□□ -0.16
FOXRED1Q96CU9 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC14.07□□□□□ -0.16
FOXRED1Q96CU9 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
FOXRED1Q96CU9 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
FOXRED1Q96CU9 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
FOXRED1Q96CU9 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.07□□□□□ -0.16
FOXRED1Q96CU9 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
FOXRED1Q96CU9 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FOXRED1Q96CU9 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
FOXRED1Q96CU9 AC008667.4-201ENST00000607370 168 ntBASIC14.07□□□□□ -0.16
FOXRED1Q96CU9 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
FOXRED1Q96CU9 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14.07□□□□□ -0.16
FOXRED1Q96CU9 AC008735.5-201ENST00000623544 497 ntBASIC14.07□□□□□ -0.16
FOXRED1Q96CU9 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
FOXRED1Q96CU9 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
FOXRED1Q96CU9 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
FOXRED1Q96CU9 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.07□□□□□ -0.16
FOXRED1Q96CU9 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms