Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SYNE2Q8WXH0 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SYNE2Q8WXH0 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SYNE2Q8WXH0 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SYNE2Q8WXH0 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SYNE2Q8WXH0 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SYNE2Q8WXH0 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC6.31□□□□□ -1.4
SYNE2Q8WXH0 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC6.31□□□□□ -1.4
SYNE2Q8WXH0 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SYNE2Q8WXH0 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
SYNE2Q8WXH0 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC6.31□□□□□ -1.4
SYNE2Q8WXH0 HLA-DMA-202ENST00000395303 1007 ntBASIC6.31□□□□□ -1.4
SYNE2Q8WXH0 HLA-DMA-203ENST00000395305 777 ntBASIC6.31□□□□□ -1.4
SYNE2Q8WXH0 CNBP-202ENST00000441626 1040 ntTSL 2 BASIC6.31□□□□□ -1.4
SYNE2Q8WXH0 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC6.31□□□□□ -1.4
SYNE2Q8WXH0 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC6.31□□□□□ -1.4
SYNE2Q8WXH0 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC6.31□□□□□ -1.4
SYNE2Q8WXH0 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SYNE2Q8WXH0 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC6.31□□□□□ -1.4
SYNE2Q8WXH0 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
SYNE2Q8WXH0 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 AC012508.2-201ENST00000567613 1472 ntBASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 AP000997.3-201ENST00000623333 2250 ntBASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 KRT18P46-201ENST00000435568 1279 ntBASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 AC100850.1-201ENST00000506768 649 ntBASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 AC008805.1-201ENST00000590892 364 ntBASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 AGER-206ENST00000375070 1463 ntTSL 5 BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 PC-204ENST00000524491 1714 ntTSL 2 BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 AC073316.2-201ENST00000414126 418 ntTSL 2 BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 LINC01823-204ENST00000438722 794 ntTSL 3 BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 AC022167.5-201ENST00000636296 1250 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 GZMH-201ENST00000216338 909 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 KCNK15-AS1-202ENST00000427303 528 ntTSL 5 BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 SPATA8-202ENST00000558553 406 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 SNHG5-213ENST00000622963 753 ntTSL 5 BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 SHC1P1-201ENST00000425230 1745 ntBASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 MIR193A-201ENST00000384882 88 ntBASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 RN7SL440P-201ENST00000577855 343 ntBASIC6.3□□□□□ -1.4
SYNE2Q8WXH0 DBP-202ENST00000593500 712 ntTSL 2 BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms