Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC44A1Q8WWI5 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC44A1Q8WWI5 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.17■□□□□ 0.18
SLC44A1Q8WWI5 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC44A1Q8WWI5 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC44A1Q8WWI5 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC44A1Q8WWI5 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.17■□□□□ 0.18
SLC44A1Q8WWI5 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SLC44A1Q8WWI5 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC44A1Q8WWI5 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC44A1Q8WWI5 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC44A1Q8WWI5 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC44A1Q8WWI5 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC44A1Q8WWI5 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.16■□□□□ 0.18
SLC44A1Q8WWI5 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC44A1Q8WWI5 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC44A1Q8WWI5 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC44A1Q8WWI5 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC44A1Q8WWI5 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SLC44A1Q8WWI5 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC44A1Q8WWI5 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC44A1Q8WWI5 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC44A1Q8WWI5 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC44A1Q8WWI5 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC44A1Q8WWI5 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC44A1Q8WWI5 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.16■□□□□ 0.18
SLC44A1Q8WWI5 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC44A1Q8WWI5 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC44A1Q8WWI5 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.16■□□□□ 0.18
SLC44A1Q8WWI5 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC44A1Q8WWI5 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.16■□□□□ 0.18
SLC44A1Q8WWI5 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC44A1Q8WWI5 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.16■□□□□ 0.18
SLC44A1Q8WWI5 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.16■□□□□ 0.18
SLC44A1Q8WWI5 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC44A1Q8WWI5 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.16■□□□□ 0.18
SLC44A1Q8WWI5 AC010507.1-201ENST00000633895 436 ntBASIC16.16■□□□□ 0.18
SLC44A1Q8WWI5 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.16■□□□□ 0.18
SLC44A1Q8WWI5 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.16■□□□□ 0.18
SLC44A1Q8WWI5 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC44A1Q8WWI5 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC44A1Q8WWI5 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC44A1Q8WWI5 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
SLC44A1Q8WWI5 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC44A1Q8WWI5 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC44A1Q8WWI5 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC44A1Q8WWI5 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC44A1Q8WWI5 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC44A1Q8WWI5 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC44A1Q8WWI5 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC44A1Q8WWI5 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC44A1Q8WWI5 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.16■□□□□ 0.18
SLC44A1Q8WWI5 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC44A1Q8WWI5 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SLC44A1Q8WWI5 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
SLC44A1Q8WWI5 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC44A1Q8WWI5 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC44A1Q8WWI5 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.15■□□□□ 0.18
SLC44A1Q8WWI5 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC44A1Q8WWI5 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SLC44A1Q8WWI5 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.15■□□□□ 0.18
SLC44A1Q8WWI5 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC44A1Q8WWI5 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC44A1Q8WWI5 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC44A1Q8WWI5 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC44A1Q8WWI5 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC44A1Q8WWI5 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC44A1Q8WWI5 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SLC44A1Q8WWI5 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC44A1Q8WWI5 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SLC44A1Q8WWI5 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.15■□□□□ 0.18
SLC44A1Q8WWI5 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC44A1Q8WWI5 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.15■□□□□ 0.18
SLC44A1Q8WWI5 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC44A1Q8WWI5 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
SLC44A1Q8WWI5 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.15■□□□□ 0.18
SLC44A1Q8WWI5 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC44A1Q8WWI5 PMS2P7-201ENST00000506558 1336 ntBASIC16.15■□□□□ 0.18
SLC44A1Q8WWI5 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC44A1Q8WWI5 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC44A1Q8WWI5 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
SLC44A1Q8WWI5 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC44A1Q8WWI5 AL136379.1-201ENST00000623471 2642 ntBASIC16.15■□□□□ 0.18
SLC44A1Q8WWI5 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.14■□□□□ 0.18
SLC44A1Q8WWI5 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
SLC44A1Q8WWI5 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
SLC44A1Q8WWI5 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.18
SLC44A1Q8WWI5 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
SLC44A1Q8WWI5 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SLC44A1Q8WWI5 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.14■□□□□ 0.17
SLC44A1Q8WWI5 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SLC44A1Q8WWI5 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC44A1Q8WWI5 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.14■□□□□ 0.17
SLC44A1Q8WWI5 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC44A1Q8WWI5 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC44A1Q8WWI5 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC44A1Q8WWI5 TCAF2P1-201ENST00000291129 2421 ntBASIC16.14■□□□□ 0.17
SLC44A1Q8WWI5 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.14■□□□□ 0.17
SLC44A1Q8WWI5 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.14■□□□□ 0.17
SLC44A1Q8WWI5 CRYGEP-201ENST00000412192 528 ntBASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms