Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
UBA3Q8TBC4 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UBA3Q8TBC4 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBA3Q8TBC4 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBA3Q8TBC4 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.05■□□□□ 0.32
UBA3Q8TBC4 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.05■□□□□ 0.32
UBA3Q8TBC4 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.05■□□□□ 0.32
UBA3Q8TBC4 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBA3Q8TBC4 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBA3Q8TBC4 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.05■□□□□ 0.32
UBA3Q8TBC4 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
UBA3Q8TBC4 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBA3Q8TBC4 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
UBA3Q8TBC4 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
UBA3Q8TBC4 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.04■□□□□ 0.32
UBA3Q8TBC4 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
UBA3Q8TBC4 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
UBA3Q8TBC4 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBA3Q8TBC4 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBA3Q8TBC4 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBA3Q8TBC4 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.04■□□□□ 0.32
UBA3Q8TBC4 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBA3Q8TBC4 BNIP3P1-202ENST00000550043 1585 ntBASIC17.04■□□□□ 0.32
UBA3Q8TBC4 CYP4F24P-201ENST00000586049 1580 ntBASIC17.04■□□□□ 0.32
UBA3Q8TBC4 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.04■□□□□ 0.32
UBA3Q8TBC4 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBA3Q8TBC4 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBA3Q8TBC4 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBA3Q8TBC4 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBA3Q8TBC4 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.04■□□□□ 0.32
UBA3Q8TBC4 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
UBA3Q8TBC4 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
UBA3Q8TBC4 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.04■□□□□ 0.32
UBA3Q8TBC4 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.04■□□□□ 0.32
UBA3Q8TBC4 FAM86GP-201ENST00000448322 971 ntBASIC17.04■□□□□ 0.32
UBA3Q8TBC4 KLF2P3-201ENST00000451977 1087 ntBASIC17.04■□□□□ 0.32
UBA3Q8TBC4 AC125807.1-201ENST00000483097 614 ntBASIC17.04■□□□□ 0.32
UBA3Q8TBC4 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.04■□□□□ 0.32
UBA3Q8TBC4 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.04■□□□□ 0.32
UBA3Q8TBC4 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.04■□□□□ 0.32
UBA3Q8TBC4 DUX4L27-201ENST00000554796 1261 ntBASIC17.04■□□□□ 0.32
UBA3Q8TBC4 AC026979.3-201ENST00000607315 403 ntBASIC17.04■□□□□ 0.32
UBA3Q8TBC4 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
UBA3Q8TBC4 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
UBA3Q8TBC4 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
UBA3Q8TBC4 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBA3Q8TBC4 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBA3Q8TBC4 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBA3Q8TBC4 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.04■□□□□ 0.32
UBA3Q8TBC4 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.04■□□□□ 0.32
UBA3Q8TBC4 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBA3Q8TBC4 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBA3Q8TBC4 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.04■□□□□ 0.32
UBA3Q8TBC4 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.04■□□□□ 0.32
UBA3Q8TBC4 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.04■□□□□ 0.32
UBA3Q8TBC4 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
UBA3Q8TBC4 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
UBA3Q8TBC4 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.03■□□□□ 0.32
UBA3Q8TBC4 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.03■□□□□ 0.32
UBA3Q8TBC4 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UBA3Q8TBC4 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBA3Q8TBC4 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.03■□□□□ 0.32
UBA3Q8TBC4 PRAL-201ENST00000624952 3286 ntBASIC17.03■□□□□ 0.32
UBA3Q8TBC4 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBA3Q8TBC4 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UBA3Q8TBC4 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.03■□□□□ 0.32
UBA3Q8TBC4 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
UBA3Q8TBC4 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBA3Q8TBC4 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBA3Q8TBC4 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBA3Q8TBC4 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBA3Q8TBC4 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBA3Q8TBC4 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UBA3Q8TBC4 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBA3Q8TBC4 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.03■□□□□ 0.32
UBA3Q8TBC4 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBA3Q8TBC4 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.03■□□□□ 0.32
UBA3Q8TBC4 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.03■□□□□ 0.32
UBA3Q8TBC4 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.03■□□□□ 0.32
UBA3Q8TBC4 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.03■□□□□ 0.32
UBA3Q8TBC4 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.03■□□□□ 0.32
UBA3Q8TBC4 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.03■□□□□ 0.32
UBA3Q8TBC4 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.03■□□□□ 0.32
UBA3Q8TBC4 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.03■□□□□ 0.32
UBA3Q8TBC4 AC051619.7-201ENST00000568314 623 ntBASIC17.03■□□□□ 0.32
UBA3Q8TBC4 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
UBA3Q8TBC4 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.03■□□□□ 0.32
UBA3Q8TBC4 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBA3Q8TBC4 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.03■□□□□ 0.32
UBA3Q8TBC4 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.03■□□□□ 0.32
UBA3Q8TBC4 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
UBA3Q8TBC4 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
UBA3Q8TBC4 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.03■□□□□ 0.32
UBA3Q8TBC4 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBA3Q8TBC4 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UBA3Q8TBC4 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UBA3Q8TBC4 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UBA3Q8TBC4 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.03■□□□□ 0.32
UBA3Q8TBC4 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBA3Q8TBC4 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms