Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NEDD1Q8NHV4 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC18.64■□□□□ 0.57
NEDD1Q8NHV4 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
NEDD1Q8NHV4 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
NEDD1Q8NHV4 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NEDD1Q8NHV4 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NEDD1Q8NHV4 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
NEDD1Q8NHV4 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC18.64■□□□□ 0.57
NEDD1Q8NHV4 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
NEDD1Q8NHV4 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
NEDD1Q8NHV4 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NEDD1Q8NHV4 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
NEDD1Q8NHV4 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
NEDD1Q8NHV4 AL607033.1-201ENST00000623900 1599 ntBASIC18.64■□□□□ 0.57
NEDD1Q8NHV4 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.63■□□□□ 0.57
NEDD1Q8NHV4 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NEDD1Q8NHV4 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
NEDD1Q8NHV4 AC124067.4-201ENST00000519691 2379 ntBASIC18.63■□□□□ 0.57
NEDD1Q8NHV4 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NEDD1Q8NHV4 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
NEDD1Q8NHV4 CDC14C-201ENST00000428251 1719 ntBASIC18.63■□□□□ 0.57
NEDD1Q8NHV4 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.63■□□□□ 0.57
NEDD1Q8NHV4 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NEDD1Q8NHV4 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC18.63■□□□□ 0.57
NEDD1Q8NHV4 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
NEDD1Q8NHV4 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NEDD1Q8NHV4 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
NEDD1Q8NHV4 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NEDD1Q8NHV4 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NEDD1Q8NHV4 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NEDD1Q8NHV4 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC18.63■□□□□ 0.57
NEDD1Q8NHV4 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
NEDD1Q8NHV4 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC18.63■□□□□ 0.57
NEDD1Q8NHV4 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
NEDD1Q8NHV4 TOMM22P5-201ENST00000416399 439 ntBASIC18.63■□□□□ 0.57
NEDD1Q8NHV4 KRT18P64-201ENST00000434946 1219 ntBASIC18.63■□□□□ 0.57
NEDD1Q8NHV4 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC18.63■□□□□ 0.57
NEDD1Q8NHV4 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC18.63■□□□□ 0.57
NEDD1Q8NHV4 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NEDD1Q8NHV4 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NEDD1Q8NHV4 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
NEDD1Q8NHV4 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.63■□□□□ 0.57
NEDD1Q8NHV4 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC18.63■□□□□ 0.57
NEDD1Q8NHV4 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NEDD1Q8NHV4 RRP7BP-205ENST00000566851 833 ntBASIC18.63■□□□□ 0.57
NEDD1Q8NHV4 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC18.63■□□□□ 0.57
NEDD1Q8NHV4 CECR7-204ENST00000609932 568 ntTSL 2 BASIC18.63■□□□□ 0.57
NEDD1Q8NHV4 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC18.63■□□□□ 0.57
NEDD1Q8NHV4 SRP9-204ENST00000619790 377 ntTSL 2 BASIC18.63■□□□□ 0.57
NEDD1Q8NHV4 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC18.63■□□□□ 0.57
NEDD1Q8NHV4 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NEDD1Q8NHV4 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC18.63■□□□□ 0.57
NEDD1Q8NHV4 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NEDD1Q8NHV4 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NEDD1Q8NHV4 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NEDD1Q8NHV4 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NEDD1Q8NHV4 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NEDD1Q8NHV4 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NEDD1Q8NHV4 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC18.63■□□□□ 0.57
NEDD1Q8NHV4 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.63■□□□□ 0.57
NEDD1Q8NHV4 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC18.63■□□□□ 0.57
NEDD1Q8NHV4 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
NEDD1Q8NHV4 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NEDD1Q8NHV4 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NEDD1Q8NHV4 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC18.63■□□□□ 0.57
NEDD1Q8NHV4 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC18.62■□□□□ 0.57
NEDD1Q8NHV4 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NEDD1Q8NHV4 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NEDD1Q8NHV4 PCDHB19P-201ENST00000570871 2371 ntBASIC18.62■□□□□ 0.57
NEDD1Q8NHV4 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NEDD1Q8NHV4 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NEDD1Q8NHV4 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NEDD1Q8NHV4 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC18.62■□□□□ 0.57
NEDD1Q8NHV4 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
NEDD1Q8NHV4 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC18.62■□□□□ 0.57
NEDD1Q8NHV4 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC18.62■□□□□ 0.57
NEDD1Q8NHV4 GRAP-202ENST00000395635 834 ntTSL 2 BASIC18.62■□□□□ 0.57
NEDD1Q8NHV4 METTL26-204ENST00000397665 558 ntTSL 2 BASIC18.62■□□□□ 0.57
NEDD1Q8NHV4 DGCR5-201ENST00000399539 862 ntBASIC18.62■□□□□ 0.57
NEDD1Q8NHV4 GSAP-205ENST00000430584 600 ntTSL 5 BASIC18.62■□□□□ 0.57
NEDD1Q8NHV4 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC18.62■□□□□ 0.57
NEDD1Q8NHV4 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC18.62■□□□□ 0.57
NEDD1Q8NHV4 RN7SL692P-201ENST00000464677 288 ntBASIC18.62■□□□□ 0.57
NEDD1Q8NHV4 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
NEDD1Q8NHV4 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC18.62■□□□□ 0.57
NEDD1Q8NHV4 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC18.62■□□□□ 0.57
NEDD1Q8NHV4 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC18.62■□□□□ 0.57
NEDD1Q8NHV4 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC18.62■□□□□ 0.57
NEDD1Q8NHV4 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC18.62■□□□□ 0.57
NEDD1Q8NHV4 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
NEDD1Q8NHV4 BLK-205ENST00000529894 2017 ntTSL 5 BASIC18.62■□□□□ 0.57
NEDD1Q8NHV4 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NEDD1Q8NHV4 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
NEDD1Q8NHV4 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
NEDD1Q8NHV4 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
NEDD1Q8NHV4 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
NEDD1Q8NHV4 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
NEDD1Q8NHV4 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NEDD1Q8NHV4 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NEDD1Q8NHV4 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms