Protein–RNA interactions for Protein: Q8NEB9

PIK3C3, Phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3Q8NEB9 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PIK3C3Q8NEB9 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PIK3C3Q8NEB9 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.19■□□□□ 0.02
PIK3C3Q8NEB9 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.19■□□□□ 0.02
PIK3C3Q8NEB9 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PIK3C3Q8NEB9 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.19■□□□□ 0.02
PIK3C3Q8NEB9 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.19■□□□□ 0.02
PIK3C3Q8NEB9 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.19■□□□□ 0.02
PIK3C3Q8NEB9 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PIK3C3Q8NEB9 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.19■□□□□ 0.02
PIK3C3Q8NEB9 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.19■□□□□ 0.02
PIK3C3Q8NEB9 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.19■□□□□ 0.02
PIK3C3Q8NEB9 AP002469.2-201ENST00000531724 424 ntBASIC15.19■□□□□ 0.02
PIK3C3Q8NEB9 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.19■□□□□ 0.02
PIK3C3Q8NEB9 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.19■□□□□ 0.02
PIK3C3Q8NEB9 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.19■□□□□ 0.02
PIK3C3Q8NEB9 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.19■□□□□ 0.02
PIK3C3Q8NEB9 AL773604.1-201ENST00000617417 272 ntBASIC15.19■□□□□ 0.02
PIK3C3Q8NEB9 MIR1199-201ENST00000621445 119 ntBASIC15.19■□□□□ 0.02
PIK3C3Q8NEB9 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.19■□□□□ 0.02
PIK3C3Q8NEB9 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.19■□□□□ 0.02
PIK3C3Q8NEB9 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.19■□□□□ 0.02
PIK3C3Q8NEB9 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PIK3C3Q8NEB9 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.19■□□□□ 0.02
PIK3C3Q8NEB9 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.19■□□□□ 0.02
PIK3C3Q8NEB9 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PIK3C3Q8NEB9 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.19■□□□□ 0.02
PIK3C3Q8NEB9 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.19■□□□□ 0.02
PIK3C3Q8NEB9 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.19■□□□□ 0.02
PIK3C3Q8NEB9 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
PIK3C3Q8NEB9 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PIK3C3Q8NEB9 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PIK3C3Q8NEB9 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.19■□□□□ 0.02
PIK3C3Q8NEB9 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PIK3C3Q8NEB9 AL161772.1-201ENST00000610494 4412 ntBASIC15.18■□□□□ 0.02
PIK3C3Q8NEB9 AL365209.1-201ENST00000624418 6473 ntBASIC15.18■□□□□ 0.02
PIK3C3Q8NEB9 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
PIK3C3Q8NEB9 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
PIK3C3Q8NEB9 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PIK3C3Q8NEB9 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.18■□□□□ 0.02
PIK3C3Q8NEB9 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PIK3C3Q8NEB9 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PIK3C3Q8NEB9 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PIK3C3Q8NEB9 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
PIK3C3Q8NEB9 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PIK3C3Q8NEB9 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
PIK3C3Q8NEB9 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PIK3C3Q8NEB9 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PIK3C3Q8NEB9 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
PIK3C3Q8NEB9 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PIK3C3Q8NEB9 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
PIK3C3Q8NEB9 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.18■□□□□ 0.02
PIK3C3Q8NEB9 RPS15P9-201ENST00000494093 319 ntBASIC15.18■□□□□ 0.02
PIK3C3Q8NEB9 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.18■□□□□ 0.02
PIK3C3Q8NEB9 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.18■□□□□ 0.02
PIK3C3Q8NEB9 AL662844.1-201ENST00000546340 181 ntBASIC15.18■□□□□ 0.02
PIK3C3Q8NEB9 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.18■□□□□ 0.02
PIK3C3Q8NEB9 AC104692.2-201ENST00000603054 253 ntBASIC15.18■□□□□ 0.02
PIK3C3Q8NEB9 GGTLC5P-201ENST00000617623 998 ntBASIC15.18■□□□□ 0.02
PIK3C3Q8NEB9 AC008735.5-201ENST00000623544 497 ntBASIC15.18■□□□□ 0.02
PIK3C3Q8NEB9 PGM5P2-202ENST00000637225 1043 ntBASIC15.18■□□□□ 0.02
PIK3C3Q8NEB9 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PIK3C3Q8NEB9 AC136621.1-201ENST00000624017 2304 ntBASIC15.18■□□□□ 0.02
PIK3C3Q8NEB9 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PIK3C3Q8NEB9 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.18■□□□□ 0.02
PIK3C3Q8NEB9 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.18■□□□□ 0.02
PIK3C3Q8NEB9 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PIK3C3Q8NEB9 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
PIK3C3Q8NEB9 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PIK3C3Q8NEB9 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PIK3C3Q8NEB9 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.18■□□□□ 0.02
PIK3C3Q8NEB9 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
PIK3C3Q8NEB9 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PIK3C3Q8NEB9 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.17■□□□□ 0.02
PIK3C3Q8NEB9 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PIK3C3Q8NEB9 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
PIK3C3Q8NEB9 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PIK3C3Q8NEB9 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PIK3C3Q8NEB9 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PIK3C3Q8NEB9 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.17■□□□□ 0.02
PIK3C3Q8NEB9 AC020658.6-201ENST00000623564 1870 ntBASIC15.17■□□□□ 0.02
PIK3C3Q8NEB9 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.17■□□□□ 0.02
PIK3C3Q8NEB9 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PIK3C3Q8NEB9 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PIK3C3Q8NEB9 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PIK3C3Q8NEB9 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
PIK3C3Q8NEB9 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.17■□□□□ 0.02
PIK3C3Q8NEB9 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PIK3C3Q8NEB9 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.17■□□□□ 0.02
PIK3C3Q8NEB9 AC093909.1-201ENST00000504731 1122 ntBASIC15.17■□□□□ 0.02
PIK3C3Q8NEB9 AC136632.2-201ENST00000512891 861 ntBASIC15.17■□□□□ 0.02
PIK3C3Q8NEB9 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.17■□□□□ 0.02
PIK3C3Q8NEB9 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.17■□□□□ 0.02
PIK3C3Q8NEB9 CBFB-203ENST00000561924 584 ntTSL 5 BASIC15.17■□□□□ 0.02
PIK3C3Q8NEB9 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.17■□□□□ 0.02
PIK3C3Q8NEB9 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.17■□□□□ 0.02
PIK3C3Q8NEB9 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PIK3C3Q8NEB9 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PIK3C3Q8NEB9 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
PIK3C3Q8NEB9 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms