Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
C3orf56Q8N813 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
C3orf56Q8N813 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
C3orf56Q8N813 TUBB8P12-201ENST00000308911 1335 ntBASIC12.61□□□□□ -0.39
C3orf56Q8N813 TUBB7P-202ENST00000428444 1305 ntBASIC12.61□□□□□ -0.39
C3orf56Q8N813 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC12.61□□□□□ -0.39
C3orf56Q8N813 TUBB8P7-204ENST00000567960 1332 ntBASIC12.61□□□□□ -0.39
C3orf56Q8N813 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC12.61□□□□□ -0.39
C3orf56Q8N813 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
C3orf56Q8N813 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
C3orf56Q8N813 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
C3orf56Q8N813 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
C3orf56Q8N813 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
C3orf56Q8N813 AC108860.2-201ENST00000562760 2183 ntBASIC12.6□□□□□ -0.39
C3orf56Q8N813 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC12.6□□□□□ -0.39
C3orf56Q8N813 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
C3orf56Q8N813 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
C3orf56Q8N813 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
C3orf56Q8N813 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
C3orf56Q8N813 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC12.6□□□□□ -0.39
C3orf56Q8N813 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
C3orf56Q8N813 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
C3orf56Q8N813 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
C3orf56Q8N813 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
C3orf56Q8N813 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
C3orf56Q8N813 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
C3orf56Q8N813 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
C3orf56Q8N813 ZBTB12BP-201ENST00000314232 1122 ntBASIC12.6□□□□□ -0.39
C3orf56Q8N813 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
C3orf56Q8N813 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
C3orf56Q8N813 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
C3orf56Q8N813 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
C3orf56Q8N813 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
C3orf56Q8N813 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC12.6□□□□□ -0.39
C3orf56Q8N813 RAD18-204ENST00000418463 563 ntTSL 4 BASIC12.6□□□□□ -0.39
C3orf56Q8N813 RAD18-205ENST00000421052 582 ntTSL 3 BASIC12.6□□□□□ -0.39
C3orf56Q8N813 RPL28-203ENST00000428193 573 ntTSL 2 BASIC12.6□□□□□ -0.39
C3orf56Q8N813 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
C3orf56Q8N813 AC007551.1-201ENST00000457394 519 ntBASIC12.6□□□□□ -0.39
C3orf56Q8N813 KRT8P13-201ENST00000463294 1010 ntBASIC12.6□□□□□ -0.39
C3orf56Q8N813 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC12.6□□□□□ -0.39
C3orf56Q8N813 RN7SL399P-201ENST00000471648 279 ntBASIC12.6□□□□□ -0.39
C3orf56Q8N813 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
C3orf56Q8N813 RPL28-207ENST00000558815 616 ntTSL 2 BASIC12.6□□□□□ -0.39
C3orf56Q8N813 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC12.6□□□□□ -0.39
C3orf56Q8N813 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC12.6□□□□□ -0.39
C3orf56Q8N813 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC12.6□□□□□ -0.39
C3orf56Q8N813 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
C3orf56Q8N813 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC12.6□□□□□ -0.39
C3orf56Q8N813 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
C3orf56Q8N813 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
C3orf56Q8N813 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
C3orf56Q8N813 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
C3orf56Q8N813 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
C3orf56Q8N813 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
C3orf56Q8N813 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
C3orf56Q8N813 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
C3orf56Q8N813 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
C3orf56Q8N813 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
C3orf56Q8N813 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
C3orf56Q8N813 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
C3orf56Q8N813 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
C3orf56Q8N813 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
C3orf56Q8N813 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
C3orf56Q8N813 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
C3orf56Q8N813 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
C3orf56Q8N813 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
C3orf56Q8N813 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC12.6□□□□□ -0.39
C3orf56Q8N813 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
C3orf56Q8N813 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
C3orf56Q8N813 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
C3orf56Q8N813 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
C3orf56Q8N813 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
C3orf56Q8N813 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
C3orf56Q8N813 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
C3orf56Q8N813 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
C3orf56Q8N813 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
C3orf56Q8N813 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
C3orf56Q8N813 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
C3orf56Q8N813 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC12.59□□□□□ -0.39
C3orf56Q8N813 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC12.59□□□□□ -0.39
C3orf56Q8N813 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
C3orf56Q8N813 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
C3orf56Q8N813 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
C3orf56Q8N813 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
C3orf56Q8N813 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC12.59□□□□□ -0.39
C3orf56Q8N813 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC12.59□□□□□ -0.39
C3orf56Q8N813 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
C3orf56Q8N813 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
C3orf56Q8N813 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
C3orf56Q8N813 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
C3orf56Q8N813 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
C3orf56Q8N813 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
C3orf56Q8N813 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
C3orf56Q8N813 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
C3orf56Q8N813 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
C3orf56Q8N813 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC12.59□□□□□ -0.39
C3orf56Q8N813 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
C3orf56Q8N813 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC12.59□□□□□ -0.39
C3orf56Q8N813 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms