Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC19.22■□□□□ 0.67
SLX4Q8IY92 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLX4Q8IY92 UBL5-208ENST00000593087 320 ntTSL 3 BASIC19.22■□□□□ 0.67
SLX4Q8IY92 SNX1-214ENST00000625244 324 ntTSL 5 BASIC19.22■□□□□ 0.67
SLX4Q8IY92 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLX4Q8IY92 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLX4Q8IY92 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.22■□□□□ 0.67
SLX4Q8IY92 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC19.22■□□□□ 0.67
SLX4Q8IY92 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLX4Q8IY92 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLX4Q8IY92 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLX4Q8IY92 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLX4Q8IY92 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLX4Q8IY92 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLX4Q8IY92 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLX4Q8IY92 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
SLX4Q8IY92 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLX4Q8IY92 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.22■□□□□ 0.67
SLX4Q8IY92 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLX4Q8IY92 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.21■□□□□ 0.67
SLX4Q8IY92 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SLX4Q8IY92 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
SLX4Q8IY92 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC19.21■□□□□ 0.67
SLX4Q8IY92 RPS2P36-201ENST00000456516 831 ntBASIC19.21■□□□□ 0.67
SLX4Q8IY92 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC19.21■□□□□ 0.67
SLX4Q8IY92 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC19.21■□□□□ 0.67
SLX4Q8IY92 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC19.21■□□□□ 0.67
SLX4Q8IY92 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLX4Q8IY92 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLX4Q8IY92 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC19.21■□□□□ 0.67
SLX4Q8IY92 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
SLX4Q8IY92 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC19.21■□□□□ 0.67
SLX4Q8IY92 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
SLX4Q8IY92 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLX4Q8IY92 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC19.21■□□□□ 0.67
SLX4Q8IY92 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLX4Q8IY92 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLX4Q8IY92 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLX4Q8IY92 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC19.21■□□□□ 0.67
SLX4Q8IY92 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLX4Q8IY92 AP001094.4-201ENST00000579008 2176 ntBASIC19.21■□□□□ 0.67
SLX4Q8IY92 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLX4Q8IY92 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC19.21■□□□□ 0.67
SLX4Q8IY92 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLX4Q8IY92 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC19.21■□□□□ 0.67
SLX4Q8IY92 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
SLX4Q8IY92 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC19.21■□□□□ 0.67
SLX4Q8IY92 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC19.21■□□□□ 0.67
SLX4Q8IY92 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC19.21■□□□□ 0.67
SLX4Q8IY92 AP005019.2-201ENST00000615104 511 ntBASIC19.21■□□□□ 0.67
SLX4Q8IY92 MIR6727-201ENST00000620702 65 ntBASIC19.21■□□□□ 0.67
SLX4Q8IY92 AC132938.4-201ENST00000623835 848 ntBASIC19.21■□□□□ 0.67
SLX4Q8IY92 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
SLX4Q8IY92 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.2■□□□□ 0.66
SLX4Q8IY92 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC19.2■□□□□ 0.66
SLX4Q8IY92 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLX4Q8IY92 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLX4Q8IY92 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLX4Q8IY92 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLX4Q8IY92 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC19.2■□□□□ 0.66
SLX4Q8IY92 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SLX4Q8IY92 AL354989.2-201ENST00000435838 1540 ntBASIC19.2■□□□□ 0.66
SLX4Q8IY92 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLX4Q8IY92 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SLX4Q8IY92 AC091046.1-201ENST00000331871 207 ntBASIC19.2■□□□□ 0.66
SLX4Q8IY92 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLX4Q8IY92 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLX4Q8IY92 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLX4Q8IY92 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLX4Q8IY92 TISP43-201ENST00000409793 538 ntTSL 4 BASIC19.2■□□□□ 0.66
SLX4Q8IY92 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC19.2■□□□□ 0.66
SLX4Q8IY92 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC19.2■□□□□ 0.66
SLX4Q8IY92 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLX4Q8IY92 IMP3P2-201ENST00000489760 475 ntBASIC19.2■□□□□ 0.66
SLX4Q8IY92 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC19.2■□□□□ 0.66
SLX4Q8IY92 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC19.2■□□□□ 0.66
SLX4Q8IY92 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
SLX4Q8IY92 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLX4Q8IY92 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLX4Q8IY92 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SLX4Q8IY92 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
SLX4Q8IY92 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC19.2■□□□□ 0.66
SLX4Q8IY92 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLX4Q8IY92 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLX4Q8IY92 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC19.19■□□□□ 0.66
SLX4Q8IY92 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLX4Q8IY92 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLX4Q8IY92 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC19.19■□□□□ 0.66
SLX4Q8IY92 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLX4Q8IY92 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC19.19■□□□□ 0.66
SLX4Q8IY92 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC19.19■□□□□ 0.66
SLX4Q8IY92 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
SLX4Q8IY92 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC19.19■□□□□ 0.66
SLX4Q8IY92 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC19.19■□□□□ 0.66
SLX4Q8IY92 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC19.19■□□□□ 0.66
SLX4Q8IY92 MIR4722-201ENST00000578292 60 ntBASIC19.19■□□□□ 0.66
SLX4Q8IY92 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC19.19■□□□□ 0.66
SLX4Q8IY92 AC018892.3-201ENST00000623986 2499 ntBASIC19.19■□□□□ 0.66
SLX4Q8IY92 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLX4Q8IY92 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms