Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC10.76□□□□□ -0.69
SCXQ7RTU7 AC023141.5-201ENST00000458585 616 ntBASIC10.76□□□□□ -0.69
SCXQ7RTU7 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC10.76□□□□□ -0.69
SCXQ7RTU7 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC10.76□□□□□ -0.69
SCXQ7RTU7 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC10.76□□□□□ -0.69
SCXQ7RTU7 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC10.76□□□□□ -0.69
SCXQ7RTU7 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
SCXQ7RTU7 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SCXQ7RTU7 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SCXQ7RTU7 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
SCXQ7RTU7 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC10.76□□□□□ -0.69
SCXQ7RTU7 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
SCXQ7RTU7 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SCXQ7RTU7 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SCXQ7RTU7 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC10.76□□□□□ -0.69
SCXQ7RTU7 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
SCXQ7RTU7 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
SCXQ7RTU7 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
SCXQ7RTU7 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
SCXQ7RTU7 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SCXQ7RTU7 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC10.76□□□□□ -0.69
SCXQ7RTU7 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
SCXQ7RTU7 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC10.76□□□□□ -0.69
SCXQ7RTU7 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC10.76□□□□□ -0.69
SCXQ7RTU7 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC10.76□□□□□ -0.69
SCXQ7RTU7 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SCXQ7RTU7 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SCXQ7RTU7 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
SCXQ7RTU7 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
SCXQ7RTU7 AC133963.1-201ENST00000504166 1679 ntBASIC10.76□□□□□ -0.69
SCXQ7RTU7 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC10.75□□□□□ -0.69
SCXQ7RTU7 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SCXQ7RTU7 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SCXQ7RTU7 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SCXQ7RTU7 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
SCXQ7RTU7 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SCXQ7RTU7 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SCXQ7RTU7 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC10.75□□□□□ -0.69
SCXQ7RTU7 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
SCXQ7RTU7 AC060834.1-201ENST00000443027 2032 ntBASIC10.75□□□□□ -0.69
SCXQ7RTU7 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SCXQ7RTU7 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SCXQ7RTU7 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC10.75□□□□□ -0.69
SCXQ7RTU7 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SCXQ7RTU7 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SCXQ7RTU7 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC10.75□□□□□ -0.69
SCXQ7RTU7 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SCXQ7RTU7 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC10.75□□□□□ -0.69
SCXQ7RTU7 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC10.75□□□□□ -0.69
SCXQ7RTU7 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SCXQ7RTU7 AL139400.1-201ENST00000366220 510 ntBASIC10.75□□□□□ -0.69
SCXQ7RTU7 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC10.75□□□□□ -0.69
SCXQ7RTU7 AL355306.1-201ENST00000415580 579 ntBASIC10.75□□□□□ -0.69
SCXQ7RTU7 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC10.75□□□□□ -0.69
SCXQ7RTU7 ADH5P3-201ENST00000433842 1137 ntBASIC10.75□□□□□ -0.69
SCXQ7RTU7 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC10.75□□□□□ -0.69
SCXQ7RTU7 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC10.75□□□□□ -0.69
SCXQ7RTU7 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC10.75□□□□□ -0.69
SCXQ7RTU7 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC10.75□□□□□ -0.69
SCXQ7RTU7 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
SCXQ7RTU7 GATB-205ENST00000508611 605 ntTSL 2 BASIC10.75□□□□□ -0.69
SCXQ7RTU7 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC10.75□□□□□ -0.69
SCXQ7RTU7 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC10.75□□□□□ -0.69
SCXQ7RTU7 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC10.75□□□□□ -0.69
SCXQ7RTU7 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC10.75□□□□□ -0.69
SCXQ7RTU7 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC10.75□□□□□ -0.69
SCXQ7RTU7 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC10.75□□□□□ -0.69
SCXQ7RTU7 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC10.75□□□□□ -0.69
SCXQ7RTU7 LSM12-202ENST00000585388 942 ntTSL 3 BASIC10.75□□□□□ -0.69
SCXQ7RTU7 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC10.75□□□□□ -0.69
SCXQ7RTU7 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
SCXQ7RTU7 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SCXQ7RTU7 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
SCXQ7RTU7 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SCXQ7RTU7 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC10.75□□□□□ -0.69
SCXQ7RTU7 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
SCXQ7RTU7 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SCXQ7RTU7 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC10.75□□□□□ -0.69
SCXQ7RTU7 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC10.75□□□□□ -0.69
SCXQ7RTU7 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SCXQ7RTU7 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC10.75□□□□□ -0.69
SCXQ7RTU7 PTENP1-202ENST00000532280 3996 ntBASIC10.75□□□□□ -0.69
SCXQ7RTU7 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
SCXQ7RTU7 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SCXQ7RTU7 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC10.75□□□□□ -0.69
SCXQ7RTU7 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
SCXQ7RTU7 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC10.75□□□□□ -0.69
SCXQ7RTU7 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SCXQ7RTU7 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SCXQ7RTU7 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
SCXQ7RTU7 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
SCXQ7RTU7 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC10.75□□□□□ -0.69
SCXQ7RTU7 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC10.75□□□□□ -0.69
SCXQ7RTU7 HARS-203ENST00000431330 1774 ntTSL 2 BASIC10.75□□□□□ -0.69
SCXQ7RTU7 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC10.75□□□□□ -0.69
SCXQ7RTU7 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SCXQ7RTU7 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC10.75□□□□□ -0.69
SCXQ7RTU7 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
SCXQ7RTU7 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
SCXQ7RTU7 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms