Protein–RNA interactions for Protein: Q5JUK3

KCNT1, Potassium channel subfamily T member 1, humanhuman

Predictions only

Length 1,230 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNT1Q5JUK3 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
KCNT1Q5JUK3 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KCNT1Q5JUK3 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
KCNT1Q5JUK3 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.92■□□□□ 0.3
KCNT1Q5JUK3 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.92■□□□□ 0.3
KCNT1Q5JUK3 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.92■□□□□ 0.3
KCNT1Q5JUK3 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.92■□□□□ 0.3
KCNT1Q5JUK3 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.92■□□□□ 0.3
KCNT1Q5JUK3 HLA-J-203ENST00000494367 1087 ntBASIC16.92■□□□□ 0.3
KCNT1Q5JUK3 KRT8P48-201ENST00000515599 1220 ntBASIC16.92■□□□□ 0.3
KCNT1Q5JUK3 AC243562.1-201ENST00000560672 389 ntBASIC16.92■□□□□ 0.3
KCNT1Q5JUK3 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
KCNT1Q5JUK3 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.92■□□□□ 0.3
KCNT1Q5JUK3 AC027307.2-201ENST00000591252 911 ntBASIC16.92■□□□□ 0.3
KCNT1Q5JUK3 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.92■□□□□ 0.3
KCNT1Q5JUK3 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.92■□□□□ 0.3
KCNT1Q5JUK3 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
KCNT1Q5JUK3 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
KCNT1Q5JUK3 AC008677.1-201ENST00000519230 1561 ntBASIC16.92■□□□□ 0.3
KCNT1Q5JUK3 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KCNT1Q5JUK3 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KCNT1Q5JUK3 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KCNT1Q5JUK3 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
KCNT1Q5JUK3 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KCNT1Q5JUK3 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.92■□□□□ 0.3
KCNT1Q5JUK3 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
KCNT1Q5JUK3 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KCNT1Q5JUK3 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
KCNT1Q5JUK3 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
KCNT1Q5JUK3 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
KCNT1Q5JUK3 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.91■□□□□ 0.3
KCNT1Q5JUK3 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.91■□□□□ 0.3
KCNT1Q5JUK3 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.91■□□□□ 0.3
KCNT1Q5JUK3 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
KCNT1Q5JUK3 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.91■□□□□ 0.3
KCNT1Q5JUK3 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
KCNT1Q5JUK3 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
KCNT1Q5JUK3 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
KCNT1Q5JUK3 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KCNT1Q5JUK3 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
KCNT1Q5JUK3 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
KCNT1Q5JUK3 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KCNT1Q5JUK3 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.91■□□□□ 0.3
KCNT1Q5JUK3 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
KCNT1Q5JUK3 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.91■□□□□ 0.3
KCNT1Q5JUK3 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.91■□□□□ 0.3
KCNT1Q5JUK3 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.91■□□□□ 0.3
KCNT1Q5JUK3 SPCS2P1-201ENST00000561636 679 ntBASIC16.91■□□□□ 0.3
KCNT1Q5JUK3 AC093520.2-201ENST00000561830 333 ntBASIC16.91■□□□□ 0.3
KCNT1Q5JUK3 AC073389.1-201ENST00000595595 795 ntBASIC16.91■□□□□ 0.3
KCNT1Q5JUK3 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
KCNT1Q5JUK3 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.91■□□□□ 0.3
KCNT1Q5JUK3 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.91■□□□□ 0.3
KCNT1Q5JUK3 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
KCNT1Q5JUK3 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
KCNT1Q5JUK3 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
KCNT1Q5JUK3 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
KCNT1Q5JUK3 AP005117.1-202ENST00000581724 1908 ntBASIC16.91■□□□□ 0.3
KCNT1Q5JUK3 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
KCNT1Q5JUK3 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KCNT1Q5JUK3 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
KCNT1Q5JUK3 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.91■□□□□ 0.3
KCNT1Q5JUK3 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KCNT1Q5JUK3 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.91■□□□□ 0.3
KCNT1Q5JUK3 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.91■□□□□ 0.3
KCNT1Q5JUK3 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.91■□□□□ 0.3
KCNT1Q5JUK3 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
KCNT1Q5JUK3 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KCNT1Q5JUK3 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.91■□□□□ 0.3
KCNT1Q5JUK3 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
KCNT1Q5JUK3 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.91■□□□□ 0.3
KCNT1Q5JUK3 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.91■□□□□ 0.3
KCNT1Q5JUK3 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
KCNT1Q5JUK3 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
KCNT1Q5JUK3 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KCNT1Q5JUK3 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.9■□□□□ 0.3
KCNT1Q5JUK3 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
KCNT1Q5JUK3 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KCNT1Q5JUK3 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KCNT1Q5JUK3 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
KCNT1Q5JUK3 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KCNT1Q5JUK3 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.9■□□□□ 0.3
KCNT1Q5JUK3 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
KCNT1Q5JUK3 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KCNT1Q5JUK3 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
KCNT1Q5JUK3 SPCS2P4-201ENST00000436160 681 ntBASIC16.9■□□□□ 0.3
KCNT1Q5JUK3 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
KCNT1Q5JUK3 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.9■□□□□ 0.3
KCNT1Q5JUK3 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.9■□□□□ 0.3
KCNT1Q5JUK3 SPDYE11-202ENST00000450699 704 ntBASIC16.9■□□□□ 0.3
KCNT1Q5JUK3 TIMM8BP1-201ENST00000452384 211 ntBASIC16.9■□□□□ 0.3
KCNT1Q5JUK3 AC079140.1-201ENST00000508039 487 ntBASIC16.9■□□□□ 0.3
KCNT1Q5JUK3 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.9■□□□□ 0.3
KCNT1Q5JUK3 AC105233.2-201ENST00000523697 349 ntBASIC16.9■□□□□ 0.3
KCNT1Q5JUK3 FAM86C2P-203ENST00000528684 1004 ntBASIC16.9■□□□□ 0.3
KCNT1Q5JUK3 AF228730.5-201ENST00000530288 346 ntBASIC16.9■□□□□ 0.3
KCNT1Q5JUK3 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
KCNT1Q5JUK3 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
KCNT1Q5JUK3 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
KCNT1Q5JUK3 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms