Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SHROOM1Q2M3G4 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC18.63■□□□□ 0.57
SHROOM1Q2M3G4 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SHROOM1Q2M3G4 HIST1H2BPS3-201ENST00000419683 341 ntBASIC18.63■□□□□ 0.57
SHROOM1Q2M3G4 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SHROOM1Q2M3G4 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC18.63■□□□□ 0.57
SHROOM1Q2M3G4 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC18.63■□□□□ 0.57
SHROOM1Q2M3G4 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC18.63■□□□□ 0.57
SHROOM1Q2M3G4 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC18.63■□□□□ 0.57
SHROOM1Q2M3G4 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC18.63■□□□□ 0.57
SHROOM1Q2M3G4 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC18.63■□□□□ 0.57
SHROOM1Q2M3G4 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC18.63■□□□□ 0.57
SHROOM1Q2M3G4 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC18.63■□□□□ 0.57
SHROOM1Q2M3G4 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC18.63■□□□□ 0.57
SHROOM1Q2M3G4 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC18.63■□□□□ 0.57
SHROOM1Q2M3G4 Six3os1_5.1-201ENST00000611000 271 ntBASIC18.63■□□□□ 0.57
SHROOM1Q2M3G4 MIR6805-201ENST00000615055 62 ntBASIC18.63■□□□□ 0.57
SHROOM1Q2M3G4 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SHROOM1Q2M3G4 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SHROOM1Q2M3G4 LTB4R2-202ENST00000528054 3092 ntBASIC18.63■□□□□ 0.57
SHROOM1Q2M3G4 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHROOM1Q2M3G4 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.63■□□□□ 0.57
SHROOM1Q2M3G4 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC18.63■□□□□ 0.57
SHROOM1Q2M3G4 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHROOM1Q2M3G4 DEK-201ENST00000244776 1441 ntTSL 2 BASIC18.63■□□□□ 0.57
SHROOM1Q2M3G4 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHROOM1Q2M3G4 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHROOM1Q2M3G4 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHROOM1Q2M3G4 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
SHROOM1Q2M3G4 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHROOM1Q2M3G4 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHROOM1Q2M3G4 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC18.63■□□□□ 0.57
SHROOM1Q2M3G4 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SHROOM1Q2M3G4 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHROOM1Q2M3G4 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHROOM1Q2M3G4 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHROOM1Q2M3G4 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHROOM1Q2M3G4 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHROOM1Q2M3G4 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
SHROOM1Q2M3G4 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHROOM1Q2M3G4 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHROOM1Q2M3G4 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.62■□□□□ 0.57
SHROOM1Q2M3G4 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SHROOM1Q2M3G4 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHROOM1Q2M3G4 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
SHROOM1Q2M3G4 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHROOM1Q2M3G4 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHROOM1Q2M3G4 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC18.62■□□□□ 0.57
SHROOM1Q2M3G4 PHKG1P2-201ENST00000457537 863 ntBASIC18.62■□□□□ 0.57
SHROOM1Q2M3G4 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SHROOM1Q2M3G4 FAM86LP-201ENST00000478302 853 ntBASIC18.62■□□□□ 0.57
SHROOM1Q2M3G4 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC18.62■□□□□ 0.57
SHROOM1Q2M3G4 NEU3-203ENST00000529024 581 ntTSL 3 BASIC18.62■□□□□ 0.57
SHROOM1Q2M3G4 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC18.62■□□□□ 0.57
SHROOM1Q2M3G4 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SHROOM1Q2M3G4 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC18.62■□□□□ 0.57
SHROOM1Q2M3G4 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
SHROOM1Q2M3G4 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SHROOM1Q2M3G4 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SHROOM1Q2M3G4 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHROOM1Q2M3G4 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHROOM1Q2M3G4 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SHROOM1Q2M3G4 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
SHROOM1Q2M3G4 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SHROOM1Q2M3G4 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.62■□□□□ 0.57
SHROOM1Q2M3G4 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHROOM1Q2M3G4 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHROOM1Q2M3G4 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
SHROOM1Q2M3G4 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHROOM1Q2M3G4 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHROOM1Q2M3G4 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHROOM1Q2M3G4 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHROOM1Q2M3G4 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SHROOM1Q2M3G4 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SHROOM1Q2M3G4 MSTO2P-201ENST00000314835 1709 ntBASIC18.61■□□□□ 0.57
SHROOM1Q2M3G4 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SHROOM1Q2M3G4 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC18.61■□□□□ 0.57
SHROOM1Q2M3G4 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC18.61■□□□□ 0.57
SHROOM1Q2M3G4 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SHROOM1Q2M3G4 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SHROOM1Q2M3G4 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC18.61■□□□□ 0.57
SHROOM1Q2M3G4 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHROOM1Q2M3G4 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHROOM1Q2M3G4 HAUS4P1-201ENST00000406739 1145 ntBASIC18.61■□□□□ 0.57
SHROOM1Q2M3G4 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SHROOM1Q2M3G4 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SHROOM1Q2M3G4 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC18.61■□□□□ 0.57
SHROOM1Q2M3G4 AC104596.2-201ENST00000512793 793 ntBASIC18.61■□□□□ 0.57
SHROOM1Q2M3G4 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC18.61■□□□□ 0.57
SHROOM1Q2M3G4 AC036164.1-201ENST00000570544 333 ntBASIC18.61■□□□□ 0.57
SHROOM1Q2M3G4 ABBA01031660.1-201ENST00000635219 756 ntBASIC18.61■□□□□ 0.57
SHROOM1Q2M3G4 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHROOM1Q2M3G4 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHROOM1Q2M3G4 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHROOM1Q2M3G4 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
SHROOM1Q2M3G4 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHROOM1Q2M3G4 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHROOM1Q2M3G4 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHROOM1Q2M3G4 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHROOM1Q2M3G4 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms