Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC19.73■□□□□ 0.75
DDR1Q08345 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
DDR1Q08345 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
DDR1Q08345 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
DDR1Q08345 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
DDR1Q08345 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
DDR1Q08345 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
DDR1Q08345 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC19.72■□□□□ 0.75
DDR1Q08345 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
DDR1Q08345 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC19.72■□□□□ 0.75
DDR1Q08345 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
DDR1Q08345 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DDR1Q08345 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
DDR1Q08345 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DDR1Q08345 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
DDR1Q08345 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
DDR1Q08345 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DDR1Q08345 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
DDR1Q08345 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DDR1Q08345 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
DDR1Q08345 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.72■□□□□ 0.75
DDR1Q08345 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC19.72■□□□□ 0.75
DDR1Q08345 AC005077.2-201ENST00000449786 690 ntBASIC19.72■□□□□ 0.75
DDR1Q08345 BX284668.4-201ENST00000453917 508 ntBASIC19.72■□□□□ 0.75
DDR1Q08345 AL590640.2-201ENST00000457038 527 ntBASIC19.72■□□□□ 0.75
DDR1Q08345 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC19.72■□□□□ 0.75
DDR1Q08345 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
DDR1Q08345 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
DDR1Q08345 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC19.72■□□□□ 0.75
DDR1Q08345 AC244452.3-201ENST00000636814 210 ntBASIC19.72■□□□□ 0.75
DDR1Q08345 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC19.72■□□□□ 0.75
DDR1Q08345 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
DDR1Q08345 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
DDR1Q08345 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DDR1Q08345 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC19.72■□□□□ 0.75
DDR1Q08345 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DDR1Q08345 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
DDR1Q08345 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
DDR1Q08345 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
DDR1Q08345 AC018735.1-201ENST00000437208 1502 ntBASIC19.71■□□□□ 0.75
DDR1Q08345 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
DDR1Q08345 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
DDR1Q08345 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DDR1Q08345 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.71■□□□□ 0.75
DDR1Q08345 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC19.71■□□□□ 0.75
DDR1Q08345 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC19.71■□□□□ 0.75
DDR1Q08345 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
DDR1Q08345 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
DDR1Q08345 GUK1-206ENST00000366723 845 ntTSL 5 BASIC19.71■□□□□ 0.75
DDR1Q08345 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC19.71■□□□□ 0.75
DDR1Q08345 FNTAP2-201ENST00000430308 634 ntBASIC19.71■□□□□ 0.75
DDR1Q08345 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC19.71■□□□□ 0.75
DDR1Q08345 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
DDR1Q08345 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
DDR1Q08345 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC19.71■□□□□ 0.75
DDR1Q08345 ADM-202ENST00000524948 584 ntTSL 2 BASIC19.71■□□□□ 0.75
DDR1Q08345 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC19.71■□□□□ 0.75
DDR1Q08345 AL450472.2-201ENST00000603663 1156 ntBASIC19.71■□□□□ 0.75
DDR1Q08345 AC093813.1-201ENST00000605066 256 ntBASIC19.71■□□□□ 0.75
DDR1Q08345 AC145423.3-201ENST00000615987 467 ntBASIC19.71■□□□□ 0.75
DDR1Q08345 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC19.71■□□□□ 0.75
DDR1Q08345 AC138028.6-201ENST00000616106 1482 ntBASIC19.71■□□□□ 0.75
DDR1Q08345 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC19.71■□□□□ 0.75
DDR1Q08345 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DDR1Q08345 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DDR1Q08345 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DDR1Q08345 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DDR1Q08345 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
DDR1Q08345 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DDR1Q08345 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
DDR1Q08345 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC19.71■□□□□ 0.75
DDR1Q08345 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DDR1Q08345 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC19.7■□□□□ 0.74
DDR1Q08345 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DDR1Q08345 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
DDR1Q08345 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
DDR1Q08345 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC19.7■□□□□ 0.74
DDR1Q08345 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
DDR1Q08345 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
DDR1Q08345 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
DDR1Q08345 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DDR1Q08345 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DDR1Q08345 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
DDR1Q08345 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
DDR1Q08345 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DDR1Q08345 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
DDR1Q08345 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DDR1Q08345 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC19.7■□□□□ 0.74
DDR1Q08345 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC19.7■□□□□ 0.74
DDR1Q08345 AC004898.1-201ENST00000451057 766 ntBASIC19.7■□□□□ 0.74
DDR1Q08345 REEP1-202ENST00000453231 940 ntTSL 2 BASIC19.7■□□□□ 0.74
DDR1Q08345 AC091804.1-201ENST00000486888 567 ntBASIC19.7■□□□□ 0.74
DDR1Q08345 SCARNA20.5-201ENST00000516991 142 ntBASIC19.7■□□□□ 0.74
DDR1Q08345 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC19.7■□□□□ 0.74
DDR1Q08345 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC19.7■□□□□ 0.74
DDR1Q08345 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC19.7■□□□□ 0.74
DDR1Q08345 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC19.7■□□□□ 0.74
DDR1Q08345 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC19.7■□□□□ 0.74
DDR1Q08345 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
DDR1Q08345 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms