Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 MIR1908-201ENST00000410394 80 ntBASIC18.17■□□□□ 0.5
CCNA1P78396 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC18.17■□□□□ 0.5
CCNA1P78396 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CCNA1P78396 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC18.17■□□□□ 0.5
CCNA1P78396 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC18.17■□□□□ 0.5
CCNA1P78396 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC18.17■□□□□ 0.5
CCNA1P78396 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC18.17■□□□□ 0.5
CCNA1P78396 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
CCNA1P78396 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCNA1P78396 MIR6869-201ENST00000619434 62 ntBASIC18.17■□□□□ 0.5
CCNA1P78396 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC18.17■□□□□ 0.5
CCNA1P78396 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC18.17■□□□□ 0.5
CCNA1P78396 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCNA1P78396 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.17■□□□□ 0.5
CCNA1P78396 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCNA1P78396 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCNA1P78396 AC078925.2-201ENST00000624013 1973 ntBASIC18.17■□□□□ 0.5
CCNA1P78396 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCNA1P78396 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC18.17■□□□□ 0.5
CCNA1P78396 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCNA1P78396 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CCNA1P78396 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCNA1P78396 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCNA1P78396 TP73-213ENST00000604479 1623 ntTSL 5 BASIC18.16■□□□□ 0.5
CCNA1P78396 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCNA1P78396 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCNA1P78396 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
CCNA1P78396 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCNA1P78396 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCNA1P78396 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC18.16■□□□□ 0.5
CCNA1P78396 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCNA1P78396 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCNA1P78396 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
CCNA1P78396 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCNA1P78396 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC18.16■□□□□ 0.5
CCNA1P78396 BAATP1-201ENST00000412284 1225 ntBASIC18.16■□□□□ 0.5
CCNA1P78396 NME6-203ENST00000415644 849 ntTSL 2 BASIC18.16■□□□□ 0.5
CCNA1P78396 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
CCNA1P78396 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCNA1P78396 AC007551.1-201ENST00000457394 519 ntBASIC18.16■□□□□ 0.5
CCNA1P78396 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC18.16■□□□□ 0.5
CCNA1P78396 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC18.16■□□□□ 0.5
CCNA1P78396 AP000812.2-201ENST00000538934 718 ntBASIC18.16■□□□□ 0.5
CCNA1P78396 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC18.16■□□□□ 0.5
CCNA1P78396 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC18.16■□□□□ 0.5
CCNA1P78396 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCNA1P78396 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCNA1P78396 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC18.16■□□□□ 0.5
CCNA1P78396 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCNA1P78396 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCNA1P78396 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCNA1P78396 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CCNA1P78396 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCNA1P78396 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCNA1P78396 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCNA1P78396 AP001094.4-201ENST00000579008 2176 ntBASIC18.15■□□□□ 0.5
CCNA1P78396 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCNA1P78396 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCNA1P78396 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CCNA1P78396 AC005332.8-201ENST00000622750 2735 ntBASIC18.15■□□□□ 0.5
CCNA1P78396 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCNA1P78396 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCNA1P78396 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.15■□□□□ 0.5
CCNA1P78396 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CCNA1P78396 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCNA1P78396 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
CCNA1P78396 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CCNA1P78396 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CCNA1P78396 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC18.15■□□□□ 0.5
CCNA1P78396 AC009053.2-201ENST00000563701 2365 ntBASIC18.15■□□□□ 0.5
CCNA1P78396 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCNA1P78396 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCNA1P78396 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC18.15■□□□□ 0.5
CCNA1P78396 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC18.15■□□□□ 0.5
CCNA1P78396 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC18.15■□□□□ 0.5
CCNA1P78396 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC18.15■□□□□ 0.5
CCNA1P78396 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC18.15■□□□□ 0.5
CCNA1P78396 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC18.15■□□□□ 0.5
CCNA1P78396 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC18.15■□□□□ 0.5
CCNA1P78396 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCNA1P78396 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCNA1P78396 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC18.15■□□□□ 0.5
CCNA1P78396 AC079316.1-201ENST00000548397 411 ntBASIC18.15■□□□□ 0.5
CCNA1P78396 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC18.15■□□□□ 0.5
CCNA1P78396 AP001063.1-201ENST00000568332 529 ntBASIC18.15■□□□□ 0.5
CCNA1P78396 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC18.15■□□□□ 0.5
CCNA1P78396 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC18.15■□□□□ 0.5
CCNA1P78396 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC18.15■□□□□ 0.5
CCNA1P78396 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC18.15■□□□□ 0.5
CCNA1P78396 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC18.15■□□□□ 0.5
CCNA1P78396 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC18.15■□□□□ 0.5
CCNA1P78396 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCNA1P78396 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CCNA1P78396 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCNA1P78396 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCNA1P78396 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCNA1P78396 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCNA1P78396 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCNA1P78396 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCNA1P78396 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms