Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RHBDL3P58872 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
RHBDL3P58872 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
RHBDL3P58872 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC18.83■□□□□ 0.61
RHBDL3P58872 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.83■□□□□ 0.61
RHBDL3P58872 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RHBDL3P58872 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RHBDL3P58872 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RHBDL3P58872 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC18.83■□□□□ 0.61
RHBDL3P58872 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RHBDL3P58872 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RHBDL3P58872 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RHBDL3P58872 ANKRD19P-201ENST00000338192 862 ntBASIC18.83■□□□□ 0.6
RHBDL3P58872 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC18.83■□□□□ 0.6
RHBDL3P58872 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RHBDL3P58872 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC18.83■□□□□ 0.6
RHBDL3P58872 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RHBDL3P58872 HIST1H2BPS3-201ENST00000419683 341 ntBASIC18.83■□□□□ 0.6
RHBDL3P58872 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC18.83■□□□□ 0.6
RHBDL3P58872 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC18.83■□□□□ 0.6
RHBDL3P58872 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC18.83■□□□□ 0.6
RHBDL3P58872 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
RHBDL3P58872 MTHFR-217ENST00000641820 1569 ntBASIC18.83■□□□□ 0.6
RHBDL3P58872 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.83■□□□□ 0.6
RHBDL3P58872 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.83■□□□□ 0.6
RHBDL3P58872 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RHBDL3P58872 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RHBDL3P58872 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.83■□□□□ 0.6
RHBDL3P58872 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RHBDL3P58872 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC18.82■□□□□ 0.6
RHBDL3P58872 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
RHBDL3P58872 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RHBDL3P58872 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC18.82■□□□□ 0.6
RHBDL3P58872 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RHBDL3P58872 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RHBDL3P58872 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RHBDL3P58872 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RHBDL3P58872 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RHBDL3P58872 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.82■□□□□ 0.6
RHBDL3P58872 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RHBDL3P58872 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RHBDL3P58872 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RHBDL3P58872 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
RHBDL3P58872 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC18.82■□□□□ 0.6
RHBDL3P58872 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
RHBDL3P58872 ACTG1P3-201ENST00000431775 1114 ntBASIC18.82■□□□□ 0.6
RHBDL3P58872 AL162726.2-201ENST00000438986 1017 ntBASIC18.82■□□□□ 0.6
RHBDL3P58872 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC18.82■□□□□ 0.6
RHBDL3P58872 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC18.82■□□□□ 0.6
RHBDL3P58872 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RHBDL3P58872 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC18.82■□□□□ 0.6
RHBDL3P58872 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC18.82■□□□□ 0.6
RHBDL3P58872 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RHBDL3P58872 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
RHBDL3P58872 MIR6775-201ENST00000617557 69 ntBASIC18.82■□□□□ 0.6
RHBDL3P58872 WNT11-204ENST00000621122 789 ntTSL 5 BASIC18.82■□□□□ 0.6
RHBDL3P58872 AL121723.1-201ENST00000445194 1519 ntBASIC18.82■□□□□ 0.6
RHBDL3P58872 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RHBDL3P58872 INTS4P2-202ENST00000614726 2019 ntBASIC18.82■□□□□ 0.6
RHBDL3P58872 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RHBDL3P58872 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RHBDL3P58872 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.82■□□□□ 0.6
RHBDL3P58872 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC18.82■□□□□ 0.6
RHBDL3P58872 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RHBDL3P58872 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RHBDL3P58872 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC18.82■□□□□ 0.6
RHBDL3P58872 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
RHBDL3P58872 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
RHBDL3P58872 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RHBDL3P58872 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC18.81■□□□□ 0.6
RHBDL3P58872 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RHBDL3P58872 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RHBDL3P58872 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RHBDL3P58872 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RHBDL3P58872 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RHBDL3P58872 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RHBDL3P58872 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC18.81■□□□□ 0.6
RHBDL3P58872 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RHBDL3P58872 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RHBDL3P58872 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC18.81■□□□□ 0.6
RHBDL3P58872 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RHBDL3P58872 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RHBDL3P58872 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC18.81■□□□□ 0.6
RHBDL3P58872 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC18.81■□□□□ 0.6
RHBDL3P58872 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
RHBDL3P58872 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC18.81■□□□□ 0.6
RHBDL3P58872 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC18.81■□□□□ 0.6
RHBDL3P58872 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RHBDL3P58872 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC18.81■□□□□ 0.6
RHBDL3P58872 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RHBDL3P58872 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC18.81■□□□□ 0.6
RHBDL3P58872 CMC2-214ENST00000565925 640 ntTSL 5 BASIC18.81■□□□□ 0.6
RHBDL3P58872 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC18.81■□□□□ 0.6
RHBDL3P58872 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC18.81■□□□□ 0.6
RHBDL3P58872 GPX4-206ENST00000588919 803 ntTSL 2 BASIC18.81■□□□□ 0.6
RHBDL3P58872 AL049840.4-201ENST00000602422 811 ntBASIC18.81■□□□□ 0.6
RHBDL3P58872 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC18.81■□□□□ 0.6
RHBDL3P58872 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC18.81■□□□□ 0.6
RHBDL3P58872 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RHBDL3P58872 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms