Protein–RNA interactions for Protein: P56817

BACE1, Beta-secretase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BACE1P56817 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
BACE1P56817 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC18.39■□□□□ 0.53
BACE1P56817 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC18.39■□□□□ 0.53
BACE1P56817 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
BACE1P56817 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC18.39■□□□□ 0.53
BACE1P56817 MIR4525-201ENST00000580000 75 ntBASIC18.39■□□□□ 0.53
BACE1P56817 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC18.39■□□□□ 0.53
BACE1P56817 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC18.39■□□□□ 0.53
BACE1P56817 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BACE1P56817 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BACE1P56817 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC18.39■□□□□ 0.53
BACE1P56817 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
BACE1P56817 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
BACE1P56817 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
BACE1P56817 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
BACE1P56817 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BACE1P56817 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.39■□□□□ 0.53
BACE1P56817 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BACE1P56817 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC18.39■□□□□ 0.53
BACE1P56817 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
BACE1P56817 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BACE1P56817 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BACE1P56817 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BACE1P56817 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
BACE1P56817 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
BACE1P56817 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC18.38■□□□□ 0.53
BACE1P56817 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
BACE1P56817 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
BACE1P56817 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC18.38■□□□□ 0.53
BACE1P56817 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
BACE1P56817 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BACE1P56817 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC18.38■□□□□ 0.53
BACE1P56817 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
BACE1P56817 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC18.38■□□□□ 0.53
BACE1P56817 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
BACE1P56817 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
BACE1P56817 FLJ38576-201ENST00000623820 2459 ntBASIC18.38■□□□□ 0.53
BACE1P56817 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
BACE1P56817 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BACE1P56817 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
BACE1P56817 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BACE1P56817 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
BACE1P56817 AC092933.1-201ENST00000393644 945 ntBASIC18.38■□□□□ 0.53
BACE1P56817 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC18.38■□□□□ 0.53
BACE1P56817 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC18.38■□□□□ 0.53
BACE1P56817 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC18.38■□□□□ 0.53
BACE1P56817 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC18.38■□□□□ 0.53
BACE1P56817 ACTBP11-201ENST00000436287 1126 ntBASIC18.38■□□□□ 0.53
BACE1P56817 RPL7P3-201ENST00000441388 714 ntBASIC18.38■□□□□ 0.53
BACE1P56817 CSF2RBP1-201ENST00000447905 391 ntBASIC18.38■□□□□ 0.53
BACE1P56817 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BACE1P56817 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
BACE1P56817 FO681548.1-201ENST00000455617 1132 ntBASIC18.38■□□□□ 0.53
BACE1P56817 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC18.38■□□□□ 0.53
BACE1P56817 NOP2-211ENST00000540228 668 ntTSL 2 BASIC18.38■□□□□ 0.53
BACE1P56817 AC009486.1-201ENST00000569860 813 ntBASIC18.38■□□□□ 0.53
BACE1P56817 MIR4538-201ENST00000581377 78 ntBASIC18.38■□□□□ 0.53
BACE1P56817 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC18.38■□□□□ 0.53
BACE1P56817 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
BACE1P56817 TECR-220ENST00000600083 1204 ntTSL 2 BASIC18.38■□□□□ 0.53
BACE1P56817 AC000095.1-201ENST00000603208 874 ntBASIC18.38■□□□□ 0.53
BACE1P56817 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
BACE1P56817 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BACE1P56817 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BACE1P56817 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.38■□□□□ 0.53
BACE1P56817 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
BACE1P56817 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
BACE1P56817 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
BACE1P56817 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC18.38■□□□□ 0.53
BACE1P56817 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC18.38■□□□□ 0.53
BACE1P56817 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BACE1P56817 AL607033.1-201ENST00000623900 1599 ntBASIC18.38■□□□□ 0.53
BACE1P56817 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC18.38■□□□□ 0.53
BACE1P56817 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BACE1P56817 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC18.38■□□□□ 0.53
BACE1P56817 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BACE1P56817 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BACE1P56817 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
BACE1P56817 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
BACE1P56817 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BACE1P56817 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
BACE1P56817 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.37■□□□□ 0.53
BACE1P56817 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
BACE1P56817 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BACE1P56817 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
BACE1P56817 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BACE1P56817 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BACE1P56817 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
BACE1P56817 GZMB-202ENST00000382540 816 ntTSL 5 BASIC18.37■□□□□ 0.53
BACE1P56817 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BACE1P56817 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
BACE1P56817 MIR1908-201ENST00000410394 80 ntBASIC18.37■□□□□ 0.53
BACE1P56817 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC18.37■□□□□ 0.53
BACE1P56817 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC18.37■□□□□ 0.53
BACE1P56817 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC18.37■□□□□ 0.53
BACE1P56817 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC18.37■□□□□ 0.53
BACE1P56817 RNA5SP412-201ENST00000516234 123 ntBASIC18.37■□□□□ 0.53
BACE1P56817 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC18.37■□□□□ 0.53
BACE1P56817 AP000812.2-201ENST00000538934 718 ntBASIC18.37■□□□□ 0.53
BACE1P56817 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms