Protein–RNA interactions for Protein: P56696

KCNQ4, Potassium voltage-gated channel subfamily KQT member 4, humanhuman

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ4P56696 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
KCNQ4P56696 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.83
KCNQ4P56696 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
KCNQ4P56696 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
KCNQ4P56696 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
KCNQ4P56696 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.83
KCNQ4P56696 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC20.27■□□□□ 0.83
KCNQ4P56696 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
KCNQ4P56696 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20.26■□□□□ 0.83
KCNQ4P56696 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC20.26■□□□□ 0.83
KCNQ4P56696 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC20.26■□□□□ 0.83
KCNQ4P56696 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC20.26■□□□□ 0.83
KCNQ4P56696 AC005052.1-201ENST00000625181 2492 ntBASIC20.26■□□□□ 0.83
KCNQ4P56696 MIR1202-201ENST00000408529 83 ntBASIC20.26■□□□□ 0.83
KCNQ4P56696 HINT2P1-201ENST00000419438 481 ntBASIC20.26■□□□□ 0.83
KCNQ4P56696 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC20.26■□□□□ 0.83
KCNQ4P56696 MPRIPP1-201ENST00000452433 1089 ntBASIC20.26■□□□□ 0.83
KCNQ4P56696 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC20.26■□□□□ 0.83
KCNQ4P56696 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
KCNQ4P56696 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC20.26■□□□□ 0.83
KCNQ4P56696 AL096828.3-201ENST00000615354 462 ntBASIC20.26■□□□□ 0.83
KCNQ4P56696 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
KCNQ4P56696 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC20.26■□□□□ 0.83
KCNQ4P56696 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
KCNQ4P56696 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
KCNQ4P56696 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
KCNQ4P56696 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC20.26■□□□□ 0.83
KCNQ4P56696 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KCNQ4P56696 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KCNQ4P56696 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
KCNQ4P56696 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
KCNQ4P56696 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
KCNQ4P56696 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KCNQ4P56696 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KCNQ4P56696 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC20.25■□□□□ 0.83
KCNQ4P56696 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KCNQ4P56696 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
KCNQ4P56696 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
KCNQ4P56696 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KCNQ4P56696 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC20.25■□□□□ 0.83
KCNQ4P56696 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
KCNQ4P56696 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
KCNQ4P56696 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KCNQ4P56696 AC134407.2-201ENST00000625089 1978 ntBASIC20.25■□□□□ 0.83
KCNQ4P56696 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
KCNQ4P56696 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
KCNQ4P56696 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
KCNQ4P56696 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC20.25■□□□□ 0.83
KCNQ4P56696 TSACC-208ENST00000481479 741 ntTSL 2 BASIC20.25■□□□□ 0.83
KCNQ4P56696 MIR4722-201ENST00000578292 60 ntBASIC20.25■□□□□ 0.83
KCNQ4P56696 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
KCNQ4P56696 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
KCNQ4P56696 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KCNQ4P56696 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
KCNQ4P56696 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
KCNQ4P56696 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
KCNQ4P56696 DRD5P1-201ENST00000456605 1438 ntBASIC20.25■□□□□ 0.83
KCNQ4P56696 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KCNQ4P56696 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KCNQ4P56696 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
KCNQ4P56696 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KCNQ4P56696 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
KCNQ4P56696 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC20.24■□□□□ 0.83
KCNQ4P56696 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KCNQ4P56696 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
KCNQ4P56696 ZBTB45P2-201ENST00000452245 1531 ntBASIC20.24■□□□□ 0.83
KCNQ4P56696 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
KCNQ4P56696 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
KCNQ4P56696 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KCNQ4P56696 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
KCNQ4P56696 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
KCNQ4P56696 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC20.24■□□□□ 0.83
KCNQ4P56696 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KCNQ4P56696 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC20.24■□□□□ 0.83
KCNQ4P56696 HOMER2P2-201ENST00000451621 847 ntBASIC20.24■□□□□ 0.83
KCNQ4P56696 BX284668.4-201ENST00000453917 508 ntBASIC20.24■□□□□ 0.83
KCNQ4P56696 UPF3AP2-201ENST00000457924 1132 ntBASIC20.24■□□□□ 0.83
KCNQ4P56696 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC20.24■□□□□ 0.83
KCNQ4P56696 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC20.24■□□□□ 0.83
KCNQ4P56696 AL451050.2-201ENST00000606967 682 ntBASIC20.24■□□□□ 0.83
KCNQ4P56696 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC20.24■□□□□ 0.83
KCNQ4P56696 AC145423.3-201ENST00000615987 467 ntBASIC20.24■□□□□ 0.83
KCNQ4P56696 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
KCNQ4P56696 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
KCNQ4P56696 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KCNQ4P56696 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
KCNQ4P56696 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
KCNQ4P56696 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KCNQ4P56696 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KCNQ4P56696 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC20.24■□□□□ 0.83
KCNQ4P56696 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KCNQ4P56696 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
KCNQ4P56696 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KCNQ4P56696 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
KCNQ4P56696 AC138028.6-201ENST00000616106 1482 ntBASIC20.24■□□□□ 0.83
KCNQ4P56696 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
KCNQ4P56696 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
KCNQ4P56696 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC20.23■□□□□ 0.83
KCNQ4P56696 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
KCNQ4P56696 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms