Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
GFRA1P56159 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
GFRA1P56159 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GFRA1P56159 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GFRA1P56159 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
GFRA1P56159 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
GFRA1P56159 AL035633.1-201ENST00000406139 838 ntBASIC14.38□□□□□ -0.11
GFRA1P56159 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.38□□□□□ -0.11
GFRA1P56159 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.38□□□□□ -0.11
GFRA1P56159 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.38□□□□□ -0.11
GFRA1P56159 AC004461.2-201ENST00000629517 803 ntBASIC14.38□□□□□ -0.11
GFRA1P56159 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GFRA1P56159 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.38□□□□□ -0.11
GFRA1P56159 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.38□□□□□ -0.11
GFRA1P56159 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
GFRA1P56159 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GFRA1P56159 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GFRA1P56159 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GFRA1P56159 PCDH8P1-201ENST00000428983 2773 ntBASIC14.38□□□□□ -0.11
GFRA1P56159 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
GFRA1P56159 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
GFRA1P56159 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
GFRA1P56159 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GFRA1P56159 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
GFRA1P56159 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC14.37□□□□□ -0.11
GFRA1P56159 AC008894.3-201ENST00000624324 3103 ntBASIC14.37□□□□□ -0.11
GFRA1P56159 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
GFRA1P56159 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GFRA1P56159 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
GFRA1P56159 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC14.37□□□□□ -0.11
GFRA1P56159 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GFRA1P56159 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GFRA1P56159 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
GFRA1P56159 AC011477.6-201ENST00000604980 1927 ntBASIC14.37□□□□□ -0.11
GFRA1P56159 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
GFRA1P56159 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
GFRA1P56159 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GFRA1P56159 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
GFRA1P56159 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.37□□□□□ -0.11
GFRA1P56159 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GFRA1P56159 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.37□□□□□ -0.11
GFRA1P56159 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GFRA1P56159 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
GFRA1P56159 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
GFRA1P56159 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GFRA1P56159 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GFRA1P56159 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.37□□□□□ -0.11
GFRA1P56159 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GFRA1P56159 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
GFRA1P56159 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GFRA1P56159 PIN1P1-201ENST00000412108 996 ntBASIC14.37□□□□□ -0.11
GFRA1P56159 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.37□□□□□ -0.11
GFRA1P56159 SPDYE18-201ENST00000510091 1050 ntBASIC14.37□□□□□ -0.11
GFRA1P56159 AC104794.3-201ENST00000566840 1248 ntBASIC14.37□□□□□ -0.11
GFRA1P56159 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.37□□□□□ -0.11
GFRA1P56159 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.37□□□□□ -0.11
GFRA1P56159 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GFRA1P56159 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
GFRA1P56159 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.37□□□□□ -0.11
GFRA1P56159 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
GFRA1P56159 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
GFRA1P56159 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC14.37□□□□□ -0.11
GFRA1P56159 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
GFRA1P56159 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GFRA1P56159 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC14.37□□□□□ -0.11
GFRA1P56159 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
GFRA1P56159 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.37□□□□□ -0.11
GFRA1P56159 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
GFRA1P56159 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.37□□□□□ -0.11
GFRA1P56159 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.37□□□□□ -0.11
GFRA1P56159 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.37□□□□□ -0.11
GFRA1P56159 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GFRA1P56159 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.37□□□□□ -0.11
GFRA1P56159 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GFRA1P56159 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.36□□□□□ -0.11
GFRA1P56159 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GFRA1P56159 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GFRA1P56159 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.36□□□□□ -0.11
GFRA1P56159 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.36□□□□□ -0.11
GFRA1P56159 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GFRA1P56159 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GFRA1P56159 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GFRA1P56159 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC14.36□□□□□ -0.11
GFRA1P56159 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.36□□□□□ -0.11
GFRA1P56159 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.36□□□□□ -0.11
GFRA1P56159 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
GFRA1P56159 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.36□□□□□ -0.11
GFRA1P56159 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
GFRA1P56159 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GFRA1P56159 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.36□□□□□ -0.11
GFRA1P56159 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
GFRA1P56159 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GFRA1P56159 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GFRA1P56159 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GFRA1P56159 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
GFRA1P56159 COX20P2-201ENST00000452636 358 ntBASIC14.36□□□□□ -0.11
GFRA1P56159 PHKG1P2-201ENST00000457537 863 ntBASIC14.36□□□□□ -0.11
GFRA1P56159 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.36□□□□□ -0.11
GFRA1P56159 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GFRA1P56159 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms