Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 AC012557.2-201ENST00000605919 418 ntBASIC16.09■□□□□ 0.17
NUBP1P53384 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.09■□□□□ 0.17
NUBP1P53384 AC091812.3-201ENST00000621362 345 ntBASIC16.09■□□□□ 0.17
NUBP1P53384 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC16.09■□□□□ 0.17
NUBP1P53384 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NUBP1P53384 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NUBP1P53384 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
NUBP1P53384 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
NUBP1P53384 AC104581.1-202ENST00000635932 2618 ntBASIC16.09■□□□□ 0.17
NUBP1P53384 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
NUBP1P53384 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NUBP1P53384 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
NUBP1P53384 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NUBP1P53384 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NUBP1P53384 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
NUBP1P53384 AC006277.1-201ENST00000624348 1610 ntBASIC16.08■□□□□ 0.17
NUBP1P53384 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
NUBP1P53384 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.08■□□□□ 0.17
NUBP1P53384 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
NUBP1P53384 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
NUBP1P53384 AL139384.1-201ENST00000612143 3047 ntBASIC16.08■□□□□ 0.17
NUBP1P53384 LTB4R2-202ENST00000528054 3092 ntBASIC16.08■□□□□ 0.17
NUBP1P53384 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
NUBP1P53384 AC093525.9-201ENST00000624961 1746 ntBASIC16.08■□□□□ 0.17
NUBP1P53384 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
NUBP1P53384 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.17
NUBP1P53384 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
NUBP1P53384 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.08■□□□□ 0.17
NUBP1P53384 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.08■□□□□ 0.16
NUBP1P53384 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
NUBP1P53384 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NUBP1P53384 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NUBP1P53384 LGALS14-201ENST00000360675 773 ntAPPRIS P3 TSL 3 BASIC16.08■□□□□ 0.16
NUBP1P53384 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
NUBP1P53384 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
NUBP1P53384 AL050305.1-201ENST00000399993 1230 ntBASIC16.08■□□□□ 0.16
NUBP1P53384 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
NUBP1P53384 LINC01715-201ENST00000420776 624 ntTSL 2 BASIC16.08■□□□□ 0.16
NUBP1P53384 RPL13P2-201ENST00000440687 659 ntBASIC16.08■□□□□ 0.16
NUBP1P53384 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
NUBP1P53384 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NUBP1P53384 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
NUBP1P53384 AC009879.1-201ENST00000520029 839 ntBASIC16.08■□□□□ 0.16
NUBP1P53384 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC16.08■□□□□ 0.16
NUBP1P53384 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.08■□□□□ 0.16
NUBP1P53384 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC16.08■□□□□ 0.16
NUBP1P53384 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC16.08■□□□□ 0.16
NUBP1P53384 AC120045.2-201ENST00000567334 178 ntBASIC16.08■□□□□ 0.16
NUBP1P53384 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC16.08■□□□□ 0.16
NUBP1P53384 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC16.08■□□□□ 0.16
NUBP1P53384 AL353726.2-201ENST00000623259 884 ntBASIC16.08■□□□□ 0.16
NUBP1P53384 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NUBP1P53384 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NUBP1P53384 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.08■□□□□ 0.16
NUBP1P53384 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.08■□□□□ 0.16
NUBP1P53384 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NUBP1P53384 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
NUBP1P53384 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.08■□□□□ 0.16
NUBP1P53384 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.08■□□□□ 0.16
NUBP1P53384 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NUBP1P53384 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.08■□□□□ 0.16
NUBP1P53384 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NUBP1P53384 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
NUBP1P53384 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
NUBP1P53384 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC16.08■□□□□ 0.16
NUBP1P53384 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NUBP1P53384 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NUBP1P53384 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NUBP1P53384 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.08■□□□□ 0.16
NUBP1P53384 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NUBP1P53384 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
NUBP1P53384 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NUBP1P53384 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC16.07■□□□□ 0.16
NUBP1P53384 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC16.07■□□□□ 0.16
NUBP1P53384 MIR33B-201ENST00000385104 96 ntBASIC16.07■□□□□ 0.16
NUBP1P53384 ZNF736P10Y-201ENST00000403990 1110 ntBASIC16.07■□□□□ 0.16
NUBP1P53384 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC16.07■□□□□ 0.16
NUBP1P53384 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC16.07■□□□□ 0.16
NUBP1P53384 AC092447.3-201ENST00000426027 686 ntBASIC16.07■□□□□ 0.16
NUBP1P53384 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC16.07■□□□□ 0.16
NUBP1P53384 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NUBP1P53384 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC16.07■□□□□ 0.16
NUBP1P53384 AC093433.1-201ENST00000458048 571 ntBASIC16.07■□□□□ 0.16
NUBP1P53384 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC16.07■□□□□ 0.16
NUBP1P53384 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NUBP1P53384 CHMP4BP1-201ENST00000556017 588 ntBASIC16.07■□□□□ 0.16
NUBP1P53384 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NUBP1P53384 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.07■□□□□ 0.16
NUBP1P53384 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC16.07■□□□□ 0.16
NUBP1P53384 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC16.07■□□□□ 0.16
NUBP1P53384 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC16.07■□□□□ 0.16
NUBP1P53384 NDUFV2P1-201ENST00000596415 907 ntBASIC16.07■□□□□ 0.16
NUBP1P53384 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.07■□□□□ 0.16
NUBP1P53384 AC005695.3-201ENST00000614522 232 ntBASIC16.07■□□□□ 0.16
NUBP1P53384 CU633904.3-201ENST00000624042 1029 ntBASIC16.07■□□□□ 0.16
NUBP1P53384 AL109659.3-201ENST00000624985 950 ntBASIC16.07■□□□□ 0.16
NUBP1P53384 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
NUBP1P53384 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
NUBP1P53384 SLC14A1-203ENST00000415427 1554 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
NUBP1P53384 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms