Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.83■□□□□ 0.44
CENPFP49454 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CENPFP49454 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CENPFP49454 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CENPFP49454 HLA-A-202ENST00000376806 1854 ntBASIC17.82■□□□□ 0.44
CENPFP49454 REXO1L1P-202ENST00000608646 1974 ntBASIC17.82■□□□□ 0.44
CENPFP49454 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CENPFP49454 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC17.82■□□□□ 0.44
CENPFP49454 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.82■□□□□ 0.44
CENPFP49454 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC17.82■□□□□ 0.44
CENPFP49454 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.82■□□□□ 0.44
CENPFP49454 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CENPFP49454 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC17.82■□□□□ 0.44
CENPFP49454 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC17.82■□□□□ 0.44
CENPFP49454 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC17.82■□□□□ 0.44
CENPFP49454 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CENPFP49454 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC17.82■□□□□ 0.44
CENPFP49454 MIR6756-201ENST00000616240 63 ntBASIC17.82■□□□□ 0.44
CENPFP49454 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CENPFP49454 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CENPFP49454 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CENPFP49454 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CENPFP49454 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CENPFP49454 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.82■□□□□ 0.44
CENPFP49454 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CENPFP49454 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CENPFP49454 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CENPFP49454 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CENPFP49454 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CENPFP49454 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CENPFP49454 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CENPFP49454 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC17.82■□□□□ 0.44
CENPFP49454 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC17.82■□□□□ 0.44
CENPFP49454 EEF1DP6-201ENST00000449232 372 ntBASIC17.82■□□□□ 0.44
CENPFP49454 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC17.82■□□□□ 0.44
CENPFP49454 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC17.82■□□□□ 0.44
CENPFP49454 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC17.82■□□□□ 0.44
CENPFP49454 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC17.82■□□□□ 0.44
CENPFP49454 ECM1P1-201ENST00000604092 1279 ntBASIC17.82■□□□□ 0.44
CENPFP49454 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CENPFP49454 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CENPFP49454 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.82■□□□□ 0.44
CENPFP49454 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CENPFP49454 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CENPFP49454 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
CENPFP49454 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CENPFP49454 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CENPFP49454 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
CENPFP49454 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CENPFP49454 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
CENPFP49454 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CENPFP49454 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.81■□□□□ 0.44
CENPFP49454 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CENPFP49454 TEX30-203ENST00000376022 828 ntTSL 2 BASIC17.81■□□□□ 0.44
CENPFP49454 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC17.81■□□□□ 0.44
CENPFP49454 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.81■□□□□ 0.44
CENPFP49454 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CENPFP49454 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC17.81■□□□□ 0.44
CENPFP49454 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CENPFP49454 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CENPFP49454 AP000346.4-201ENST00000614827 381 ntBASIC17.81■□□□□ 0.44
CENPFP49454 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CENPFP49454 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CENPFP49454 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CENPFP49454 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CENPFP49454 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CENPFP49454 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CENPFP49454 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CENPFP49454 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CENPFP49454 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.81■□□□□ 0.44
CENPFP49454 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CENPFP49454 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CENPFP49454 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC17.81■□□□□ 0.44
CENPFP49454 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.81■□□□□ 0.44
CENPFP49454 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
CENPFP49454 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CENPFP49454 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CENPFP49454 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CENPFP49454 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
CENPFP49454 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CENPFP49454 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CENPFP49454 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CENPFP49454 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.81■□□□□ 0.44
CENPFP49454 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CENPFP49454 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC17.81■□□□□ 0.44
CENPFP49454 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CENPFP49454 AC074338.1-201ENST00000416825 156 ntBASIC17.81■□□□□ 0.44
CENPFP49454 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC17.81■□□□□ 0.44
CENPFP49454 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC17.81■□□□□ 0.44
CENPFP49454 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CENPFP49454 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC17.81■□□□□ 0.44
CENPFP49454 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC17.81■□□□□ 0.44
CENPFP49454 AL645939.5-201ENST00000606834 243 ntBASIC17.81■□□□□ 0.44
CENPFP49454 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CENPFP49454 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC17.81■□□□□ 0.44
CENPFP49454 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CENPFP49454 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.81■□□□□ 0.44
CENPFP49454 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.8■□□□□ 0.44
CENPFP49454 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CENPFP49454 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms