Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
CDC34P49427 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC12.8□□□□□ -0.36
CDC34P49427 AC005089.1-201ENST00000619486 2241 ntBASIC12.8□□□□□ -0.36
CDC34P49427 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CDC34P49427 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CDC34P49427 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CDC34P49427 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CDC34P49427 AC005622.1-201ENST00000636801 1703 ntBASIC12.79□□□□□ -0.36
CDC34P49427 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CDC34P49427 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
CDC34P49427 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CDC34P49427 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CDC34P49427 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CDC34P49427 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
CDC34P49427 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CDC34P49427 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
CDC34P49427 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CDC34P49427 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CDC34P49427 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CDC34P49427 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CDC34P49427 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CDC34P49427 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CDC34P49427 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC12.79□□□□□ -0.36
CDC34P49427 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC12.79□□□□□ -0.36
CDC34P49427 AC008677.1-201ENST00000519230 1561 ntBASIC12.79□□□□□ -0.36
CDC34P49427 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC12.79□□□□□ -0.36
CDC34P49427 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CDC34P49427 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
CDC34P49427 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CDC34P49427 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CDC34P49427 SOD2-201ENST00000337404 991 ntTSL 2 BASIC12.79□□□□□ -0.36
CDC34P49427 TLE1-202ENST00000376484 666 ntTSL 3 BASIC12.79□□□□□ -0.36
CDC34P49427 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
CDC34P49427 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
CDC34P49427 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CDC34P49427 AC113347.1-201ENST00000413321 391 ntBASIC12.79□□□□□ -0.36
CDC34P49427 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
CDC34P49427 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC12.79□□□□□ -0.36
CDC34P49427 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CDC34P49427 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC12.79□□□□□ -0.36
CDC34P49427 MINOS1P3-201ENST00000457048 203 ntBASIC12.79□□□□□ -0.36
CDC34P49427 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC12.79□□□□□ -0.36
CDC34P49427 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC12.79□□□□□ -0.36
CDC34P49427 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC12.79□□□□□ -0.36
CDC34P49427 AP005901.3-202ENST00000581653 237 ntBASIC12.79□□□□□ -0.36
CDC34P49427 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC12.79□□□□□ -0.36
CDC34P49427 AC011498.5-201ENST00000592027 486 ntBASIC12.79□□□□□ -0.36
CDC34P49427 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC12.79□□□□□ -0.36
CDC34P49427 AC073592.4-201ENST00000623827 446 ntBASIC12.79□□□□□ -0.36
CDC34P49427 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC12.79□□□□□ -0.36
CDC34P49427 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CDC34P49427 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CDC34P49427 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC12.79□□□□□ -0.36
CDC34P49427 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CDC34P49427 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CDC34P49427 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CDC34P49427 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC12.79□□□□□ -0.36
CDC34P49427 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC12.79□□□□□ -0.36
CDC34P49427 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
CDC34P49427 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CDC34P49427 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC12.79□□□□□ -0.36
CDC34P49427 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC12.79□□□□□ -0.36
CDC34P49427 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC12.79□□□□□ -0.36
CDC34P49427 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CDC34P49427 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC12.79□□□□□ -0.36
CDC34P49427 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CDC34P49427 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CDC34P49427 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC12.79□□□□□ -0.36
CDC34P49427 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC12.79□□□□□ -0.36
CDC34P49427 NCF1C-201ENST00000438382 1427 ntBASIC12.79□□□□□ -0.36
CDC34P49427 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC12.79□□□□□ -0.36
CDC34P49427 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CDC34P49427 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CDC34P49427 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CDC34P49427 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
CDC34P49427 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC12.79□□□□□ -0.36
CDC34P49427 U82695.1-201ENST00000635752 1889 ntBASIC12.78□□□□□ -0.36
CDC34P49427 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CDC34P49427 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CDC34P49427 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CDC34P49427 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC12.78□□□□□ -0.36
CDC34P49427 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
CDC34P49427 CICP4-201ENST00000447359 2812 ntBASIC12.78□□□□□ -0.36
CDC34P49427 AC079776.2-201ENST00000641154 1609 ntBASIC12.78□□□□□ -0.36
CDC34P49427 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CDC34P49427 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CDC34P49427 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CDC34P49427 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CDC34P49427 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC12.78□□□□□ -0.36
CDC34P49427 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CDC34P49427 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CDC34P49427 AC026396.1-201ENST00000419388 421 ntBASIC12.78□□□□□ -0.36
CDC34P49427 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC12.78□□□□□ -0.36
CDC34P49427 STARD13-205ENST00000439831 945 ntTSL 2 BASIC12.78□□□□□ -0.36
CDC34P49427 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC12.78□□□□□ -0.36
CDC34P49427 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC12.78□□□□□ -0.36
CDC34P49427 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC12.78□□□□□ -0.36
CDC34P49427 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC12.78□□□□□ -0.36
CDC34P49427 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC12.78□□□□□ -0.36
CDC34P49427 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms