Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 SLC22A20-204ENST00000530038 1673 ntBASIC10.79□□□□□ -0.68
PCP4P48539 AC016027.1-202ENST00000607927 1699 ntBASIC10.79□□□□□ -0.68
PCP4P48539 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
PCP4P48539 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
PCP4P48539 MEGF8-202ENST00000334370 10966 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
PCP4P48539 AC068896.1-201ENST00000494792 3422 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
PCP4P48539 ZC3H3-201ENST00000262577 3280 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
PCP4P48539 FAM177A1-203ENST00000396472 3254 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
PCP4P48539 HLA-A-202ENST00000376806 1854 ntBASIC10.79□□□□□ -0.68
PCP4P48539 TRPC4-206ENST00000379705 4059 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
PCP4P48539 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
PCP4P48539 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
PCP4P48539 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC10.79□□□□□ -0.68
PCP4P48539 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
PCP4P48539 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC10.79□□□□□ -0.68
PCP4P48539 PML-207ENST00000435786 3643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
PCP4P48539 MED24-203ENST00000394127 3456 ntTSL 2 BASIC10.79□□□□□ -0.68
PCP4P48539 BEND6-202ENST00000370746 2379 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
PCP4P48539 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
PCP4P48539 MAP2-201ENST00000199940 2241 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
PCP4P48539 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC10.79□□□□□ -0.68
PCP4P48539 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
PCP4P48539 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
PCP4P48539 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
PCP4P48539 OSBP2-204ENST00000407373 3669 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
PCP4P48539 ARL4C-201ENST00000339728 3385 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
PCP4P48539 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
PCP4P48539 HNRNPMP1-201ENST00000560685 1768 ntBASIC10.79□□□□□ -0.68
PCP4P48539 FAM234A-201ENST00000301678 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
PCP4P48539 ZMAT4-202ENST00000315769 2250 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
PCP4P48539 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC10.79□□□□□ -0.68
PCP4P48539 TMEM25-208ENST00000524725 2630 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
PCP4P48539 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC10.79□□□□□ -0.68
PCP4P48539 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC10.79□□□□□ -0.68
PCP4P48539 CLEC4F-201ENST00000272367 2475 ntAPPRIS P3 TSL 2 BASIC10.79□□□□□ -0.68
PCP4P48539 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC10.79□□□□□ -0.68
PCP4P48539 AC132938.5-201ENST00000624980 1813 ntBASIC10.79□□□□□ -0.68
PCP4P48539 P2RX1-201ENST00000225538 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
PCP4P48539 VWC2-201ENST00000340652 11299 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
PCP4P48539 PIK3CD-202ENST00000377346 5203 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
PCP4P48539 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
PCP4P48539 LVRN-201ENST00000357872 4581 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
PCP4P48539 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC10.79□□□□□ -0.68
PCP4P48539 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
PCP4P48539 ANKUB1-202ENST00000462519 2222 ntTSL 2 BASIC10.78□□□□□ -0.68
PCP4P48539 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
PCP4P48539 PLOD3-201ENST00000223127 2920 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
PCP4P48539 ORAI2-210ENST00000611770 10679 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
PCP4P48539 MAN2C1-201ENST00000267978 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PCP4P48539 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PCP4P48539 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
PCP4P48539 ROBO1-212ENST00000618833 7492 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
PCP4P48539 SPTY2D1-201ENST00000336349 5754 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PCP4P48539 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
PCP4P48539 STAT3-202ENST00000389272 2615 ntTSL 2 BASIC10.78□□□□□ -0.68
PCP4P48539 OSBPL3-204ENST00000409069 2614 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
PCP4P48539 C15orf40-201ENST00000304177 11244 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PCP4P48539 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
PCP4P48539 DNAJC30-201ENST00000395176 2485 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
PCP4P48539 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PCP4P48539 SLC6A7-201ENST00000230671 3739 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PCP4P48539 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
PCP4P48539 ARHGAP24-203ENST00000395184 4661 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
PCP4P48539 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
PCP4P48539 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
PCP4P48539 HLA-J-201ENST00000462773 1622 ntBASIC10.78□□□□□ -0.68
PCP4P48539 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC10.78□□□□□ -0.68
PCP4P48539 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PCP4P48539 PKP4P1-201ENST00000426801 2158 ntBASIC10.78□□□□□ -0.68
PCP4P48539 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PCP4P48539 PPIL2-201ENST00000335025 4929 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PCP4P48539 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
PCP4P48539 FGFR1OP-207ENST00000622353 3451 ntTSL 2 BASIC10.78□□□□□ -0.68
PCP4P48539 CRHR2-201ENST00000341843 3131 ntTSL 5 BASIC10.78□□□□□ -0.68
PCP4P48539 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC10.78□□□□□ -0.68
PCP4P48539 SEC24B-203ENST00000504968 4066 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
PCP4P48539 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PCP4P48539 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
PCP4P48539 MINK1-203ENST00000453408 3939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
PCP4P48539 BRINP2-201ENST00000361539 3558 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PCP4P48539 MED29-207ENST00000615911 3565 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
PCP4P48539 NR4A3-203ENST00000395097 3794 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
PCP4P48539 SEC24B-202ENST00000399100 3780 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
PCP4P48539 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC10.78□□□□□ -0.68
PCP4P48539 CEP68-201ENST00000260569 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
PCP4P48539 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC10.78□□□□□ -0.68
PCP4P48539 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC10.78□□□□□ -0.68
PCP4P48539 ZBTB45P2-201ENST00000452245 1531 ntBASIC10.78□□□□□ -0.68
PCP4P48539 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PCP4P48539 JAK3-207ENST00000534444 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
PCP4P48539 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
PCP4P48539 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
PCP4P48539 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PCP4P48539 KCNAB2-206ENST00000378097 4201 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
PCP4P48539 ULK4-201ENST00000301831 4613 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
PCP4P48539 CHST15-201ENST00000346248 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PCP4P48539 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PCP4P48539 ZNF502-203ENST00000436624 2314 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
PCP4P48539 ANKRD34B-201ENST00000338682 3938 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PCP4P48539 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms