Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TM4SF4P48230 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TM4SF4P48230 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TM4SF4P48230 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TM4SF4P48230 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC18.01■□□□□ 0.47
TM4SF4P48230 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TM4SF4P48230 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
TM4SF4P48230 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.01■□□□□ 0.47
TM4SF4P48230 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TM4SF4P48230 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.01■□□□□ 0.47
TM4SF4P48230 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TM4SF4P48230 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.01■□□□□ 0.47
TM4SF4P48230 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TM4SF4P48230 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TM4SF4P48230 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TM4SF4P48230 NDUFAB1P1-201ENST00000404262 460 ntBASIC18.01■□□□□ 0.47
TM4SF4P48230 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC18.01■□□□□ 0.47
TM4SF4P48230 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TM4SF4P48230 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
TM4SF4P48230 AC022217.1-201ENST00000521069 738 ntBASIC18.01■□□□□ 0.47
TM4SF4P48230 IQSEC3P1-201ENST00000538799 536 ntBASIC18.01■□□□□ 0.47
TM4SF4P48230 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC18.01■□□□□ 0.47
TM4SF4P48230 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
TM4SF4P48230 MIR3147-201ENST00000577811 66 ntBASIC18.01■□□□□ 0.47
TM4SF4P48230 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC18.01■□□□□ 0.47
TM4SF4P48230 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
TM4SF4P48230 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TM4SF4P48230 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
TM4SF4P48230 HLA-A-202ENST00000376806 1854 ntBASIC18.01■□□□□ 0.47
TM4SF4P48230 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
TM4SF4P48230 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC18.01■□□□□ 0.47
TM4SF4P48230 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
TM4SF4P48230 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18■□□□□ 0.47
TM4SF4P48230 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC18■□□□□ 0.47
TM4SF4P48230 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TM4SF4P48230 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18■□□□□ 0.47
TM4SF4P48230 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
TM4SF4P48230 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
TM4SF4P48230 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TM4SF4P48230 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC18■□□□□ 0.47
TM4SF4P48230 UFM1-202ENST00000379649 846 ntTSL 4 BASIC18■□□□□ 0.47
TM4SF4P48230 KLF2P2-201ENST00000416807 1039 ntBASIC18■□□□□ 0.47
TM4SF4P48230 AC069218.1-201ENST00000435269 762 ntBASIC18■□□□□ 0.47
TM4SF4P48230 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC18■□□□□ 0.47
TM4SF4P48230 AC024681.1-201ENST00000521917 487 ntBASIC18■□□□□ 0.47
TM4SF4P48230 RN7SL555P-201ENST00000584742 339 ntBASIC18■□□□□ 0.47
TM4SF4P48230 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC18■□□□□ 0.47
TM4SF4P48230 AL645939.5-201ENST00000606834 243 ntBASIC18■□□□□ 0.47
TM4SF4P48230 AC100757.4-201ENST00000626934 759 ntBASIC18■□□□□ 0.47
TM4SF4P48230 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TM4SF4P48230 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
TM4SF4P48230 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC18■□□□□ 0.47
TM4SF4P48230 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18■□□□□ 0.47
TM4SF4P48230 AL390961.4-201ENST00000623958 2535 ntBASIC18■□□□□ 0.47
TM4SF4P48230 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TM4SF4P48230 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18■□□□□ 0.47
TM4SF4P48230 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TM4SF4P48230 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18■□□□□ 0.47
TM4SF4P48230 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TM4SF4P48230 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TM4SF4P48230 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.99■□□□□ 0.47
TM4SF4P48230 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TM4SF4P48230 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
TM4SF4P48230 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC17.99■□□□□ 0.47
TM4SF4P48230 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
TM4SF4P48230 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.99■□□□□ 0.47
TM4SF4P48230 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.99■□□□□ 0.47
TM4SF4P48230 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
TM4SF4P48230 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
TM4SF4P48230 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC17.99■□□□□ 0.47
TM4SF4P48230 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TM4SF4P48230 CRCP-204ENST00000398684 492 ntTSL 2 BASIC17.99■□□□□ 0.47
TM4SF4P48230 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.99■□□□□ 0.47
TM4SF4P48230 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC17.99■□□□□ 0.47
TM4SF4P48230 AC114501.1-201ENST00000445949 172 ntBASIC17.99■□□□□ 0.47
TM4SF4P48230 AL596276.2-201ENST00000447525 331 ntBASIC17.99■□□□□ 0.47
TM4SF4P48230 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC17.99■□□□□ 0.47
TM4SF4P48230 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC17.99■□□□□ 0.47
TM4SF4P48230 AC091544.8-201ENST00000619490 361 ntBASIC17.99■□□□□ 0.47
TM4SF4P48230 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
TM4SF4P48230 AC008132.1-202ENST00000342005 1389 ntBASIC17.99■□□□□ 0.47
TM4SF4P48230 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TM4SF4P48230 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
TM4SF4P48230 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TM4SF4P48230 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.99■□□□□ 0.47
TM4SF4P48230 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TM4SF4P48230 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
TM4SF4P48230 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.99■□□□□ 0.47
TM4SF4P48230 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TM4SF4P48230 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TM4SF4P48230 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TM4SF4P48230 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
TM4SF4P48230 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TM4SF4P48230 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TM4SF4P48230 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.98■□□□□ 0.47
TM4SF4P48230 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
TM4SF4P48230 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.98■□□□□ 0.47
TM4SF4P48230 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TM4SF4P48230 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TM4SF4P48230 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms