Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.05■□□□□ 0.32
BRCC3P46736 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BRCC3P46736 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BRCC3P46736 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
BRCC3P46736 TARDBPP1-201ENST00000442013 1203 ntBASIC17.05■□□□□ 0.32
BRCC3P46736 MYCLP2-201ENST00000449268 967 ntBASIC17.05■□□□□ 0.32
BRCC3P46736 KRT17P7-201ENST00000451704 1104 ntBASIC17.05■□□□□ 0.32
BRCC3P46736 INE1-201ENST00000456273 945 ntBASIC17.05■□□□□ 0.32
BRCC3P46736 MEIS3P1-201ENST00000495167 958 ntBASIC17.05■□□□□ 0.32
BRCC3P46736 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC17.05■□□□□ 0.32
BRCC3P46736 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC17.05■□□□□ 0.32
BRCC3P46736 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
BRCC3P46736 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
BRCC3P46736 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC17.05■□□□□ 0.32
BRCC3P46736 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
BRCC3P46736 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC17.05■□□□□ 0.32
BRCC3P46736 CTBP2P3-201ENST00000585629 1255 ntBASIC17.05■□□□□ 0.32
BRCC3P46736 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC17.05■□□□□ 0.32
BRCC3P46736 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BRCC3P46736 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
BRCC3P46736 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
BRCC3P46736 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BRCC3P46736 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BRCC3P46736 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
BRCC3P46736 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BRCC3P46736 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
BRCC3P46736 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BRCC3P46736 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.04■□□□□ 0.32
BRCC3P46736 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.04■□□□□ 0.32
BRCC3P46736 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
BRCC3P46736 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BRCC3P46736 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
BRCC3P46736 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
BRCC3P46736 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.04■□□□□ 0.32
BRCC3P46736 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BRCC3P46736 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BRCC3P46736 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BRCC3P46736 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BRCC3P46736 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
BRCC3P46736 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
BRCC3P46736 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BRCC3P46736 AC098614.1-201ENST00000368528 745 ntBASIC17.04■□□□□ 0.32
BRCC3P46736 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BRCC3P46736 GK-202ENST00000378941 458 ntTSL 3 BASIC17.04■□□□□ 0.32
BRCC3P46736 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BRCC3P46736 AP006294.1-201ENST00000415407 339 ntBASIC17.04■□□□□ 0.32
BRCC3P46736 MEP1AP4-201ENST00000423244 1087 ntBASIC17.04■□□□□ 0.32
BRCC3P46736 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
BRCC3P46736 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC17.04■□□□□ 0.32
BRCC3P46736 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC17.04■□□□□ 0.32
BRCC3P46736 ELK1P1-201ENST00000485699 580 ntBASIC17.04■□□□□ 0.32
BRCC3P46736 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.04■□□□□ 0.32
BRCC3P46736 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC17.04■□□□□ 0.32
BRCC3P46736 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC17.04■□□□□ 0.32
BRCC3P46736 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC17.04■□□□□ 0.32
BRCC3P46736 POLE2-203ENST00000553805 496 ntTSL 2 BASIC17.04■□□□□ 0.32
BRCC3P46736 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BRCC3P46736 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC17.04■□□□□ 0.32
BRCC3P46736 MIR8072-201ENST00000614241 80 ntBASIC17.04■□□□□ 0.32
BRCC3P46736 IGHV3-72-202ENST00000621503 303 ntBASIC17.04■□□□□ 0.32
BRCC3P46736 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BRCC3P46736 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.04■□□□□ 0.32
BRCC3P46736 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
BRCC3P46736 AP001282.1-201ENST00000531301 1499 ntBASIC17.04■□□□□ 0.32
BRCC3P46736 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BRCC3P46736 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
BRCC3P46736 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BRCC3P46736 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.04■□□□□ 0.32
BRCC3P46736 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BRCC3P46736 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.04■□□□□ 0.32
BRCC3P46736 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
BRCC3P46736 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
BRCC3P46736 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BRCC3P46736 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
BRCC3P46736 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.04■□□□□ 0.32
BRCC3P46736 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
BRCC3P46736 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
BRCC3P46736 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.03■□□□□ 0.32
BRCC3P46736 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
BRCC3P46736 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
BRCC3P46736 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
BRCC3P46736 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BRCC3P46736 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
BRCC3P46736 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BRCC3P46736 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
BRCC3P46736 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
BRCC3P46736 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BRCC3P46736 PGF-202ENST00000405431 666 ntTSL 5 BASIC17.03■□□□□ 0.32
BRCC3P46736 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
BRCC3P46736 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC17.03■□□□□ 0.32
BRCC3P46736 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC17.03■□□□□ 0.32
BRCC3P46736 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC17.03■□□□□ 0.32
BRCC3P46736 RN7SL752P-201ENST00000463779 287 ntBASIC17.03■□□□□ 0.32
BRCC3P46736 NAA50-208ENST00000497255 789 ntTSL 5 BASIC17.03■□□□□ 0.32
BRCC3P46736 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
BRCC3P46736 FADS2-205ENST00000517839 469 ntTSL 3 BASIC17.03■□□□□ 0.32
BRCC3P46736 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
BRCC3P46736 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.03■□□□□ 0.32
BRCC3P46736 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
BRCC3P46736 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms