Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CBX5P45973 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
CBX5P45973 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CBX5P45973 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CBX5P45973 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CBX5P45973 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC13.96□□□□□ -0.17
CBX5P45973 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CBX5P45973 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CBX5P45973 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CBX5P45973 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC13.96□□□□□ -0.17
CBX5P45973 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC13.96□□□□□ -0.17
CBX5P45973 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CBX5P45973 PPIH-202ENST00000372549 327 ntTSL 3 BASIC13.96□□□□□ -0.17
CBX5P45973 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CBX5P45973 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CBX5P45973 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC13.96□□□□□ -0.17
CBX5P45973 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CBX5P45973 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC13.96□□□□□ -0.17
CBX5P45973 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
CBX5P45973 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CBX5P45973 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CBX5P45973 CYP2A7P1-201ENST00000595391 815 ntBASIC13.96□□□□□ -0.17
CBX5P45973 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CBX5P45973 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CBX5P45973 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC13.96□□□□□ -0.17
CBX5P45973 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CBX5P45973 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CBX5P45973 PGM5P2-202ENST00000637225 1043 ntBASIC13.96□□□□□ -0.17
CBX5P45973 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CBX5P45973 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC13.96□□□□□ -0.17
CBX5P45973 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CBX5P45973 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CBX5P45973 AC007191.1-201ENST00000623179 2995 ntBASIC13.96□□□□□ -0.17
CBX5P45973 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CBX5P45973 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CBX5P45973 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
CBX5P45973 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
CBX5P45973 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CBX5P45973 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CBX5P45973 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC13.96□□□□□ -0.18
CBX5P45973 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CBX5P45973 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CBX5P45973 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
CBX5P45973 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CBX5P45973 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CBX5P45973 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CBX5P45973 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
CBX5P45973 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.95□□□□□ -0.18
CBX5P45973 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CBX5P45973 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC13.95□□□□□ -0.18
CBX5P45973 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CBX5P45973 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
CBX5P45973 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CBX5P45973 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC13.95□□□□□ -0.18
CBX5P45973 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CBX5P45973 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC13.95□□□□□ -0.18
CBX5P45973 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CBX5P45973 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CBX5P45973 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CBX5P45973 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CBX5P45973 MED25-212ENST00000618715 1467 ntTSL 5 BASIC13.95□□□□□ -0.18
CBX5P45973 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CBX5P45973 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CBX5P45973 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
CBX5P45973 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CBX5P45973 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CBX5P45973 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC13.95□□□□□ -0.18
CBX5P45973 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CBX5P45973 IGHV3-47-201ENST00000425060 335 ntBASIC13.95□□□□□ -0.18
CBX5P45973 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC13.95□□□□□ -0.18
CBX5P45973 AC093827.2-201ENST00000512654 315 ntBASIC13.95□□□□□ -0.18
CBX5P45973 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC13.95□□□□□ -0.18
CBX5P45973 CIB2-208ENST00000560618 804 ntTSL 2 BASIC13.95□□□□□ -0.18
CBX5P45973 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC13.95□□□□□ -0.18
CBX5P45973 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC13.95□□□□□ -0.18
CBX5P45973 RBM42-202ENST00000586618 771 ntTSL 3 BASIC13.95□□□□□ -0.18
CBX5P45973 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC13.95□□□□□ -0.18
CBX5P45973 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC13.95□□□□□ -0.18
CBX5P45973 AC073347.1-201ENST00000421633 2643 ntBASIC13.95□□□□□ -0.18
CBX5P45973 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CBX5P45973 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CBX5P45973 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC13.95□□□□□ -0.18
CBX5P45973 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CBX5P45973 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
CBX5P45973 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CBX5P45973 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CBX5P45973 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CBX5P45973 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CBX5P45973 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CBX5P45973 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CBX5P45973 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC13.95□□□□□ -0.18
CBX5P45973 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CBX5P45973 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CBX5P45973 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CBX5P45973 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CBX5P45973 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CBX5P45973 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CBX5P45973 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CBX5P45973 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CBX5P45973 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms