Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.03■□□□□ 0.32
CHKAP35790 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.03■□□□□ 0.32
CHKAP35790 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHKAP35790 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.02■□□□□ 0.32
CHKAP35790 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CHKAP35790 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
CHKAP35790 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.02■□□□□ 0.32
CHKAP35790 AC008677.1-201ENST00000519230 1561 ntBASIC17.02■□□□□ 0.32
CHKAP35790 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHKAP35790 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CHKAP35790 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CHKAP35790 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CHKAP35790 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.02■□□□□ 0.32
CHKAP35790 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
CHKAP35790 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHKAP35790 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHKAP35790 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHKAP35790 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHKAP35790 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CHKAP35790 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHKAP35790 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.02■□□□□ 0.32
CHKAP35790 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.02■□□□□ 0.32
CHKAP35790 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.02■□□□□ 0.32
CHKAP35790 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CHKAP35790 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.02■□□□□ 0.32
CHKAP35790 MIR6080-201ENST00000617359 66 ntBASIC17.02■□□□□ 0.32
CHKAP35790 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.02■□□□□ 0.32
CHKAP35790 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHKAP35790 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHKAP35790 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHKAP35790 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.02■□□□□ 0.31
CHKAP35790 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHKAP35790 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHKAP35790 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.02■□□□□ 0.31
CHKAP35790 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHKAP35790 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHKAP35790 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.02■□□□□ 0.31
CHKAP35790 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHKAP35790 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CHKAP35790 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CHKAP35790 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHKAP35790 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHKAP35790 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.01■□□□□ 0.31
CHKAP35790 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CHKAP35790 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
CHKAP35790 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CHKAP35790 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CHKAP35790 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CHKAP35790 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHKAP35790 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHKAP35790 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CHKAP35790 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHKAP35790 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CHKAP35790 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CHKAP35790 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CHKAP35790 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CHKAP35790 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CHKAP35790 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CHKAP35790 AC107890.1-201ENST00000422478 521 ntBASIC17.01■□□□□ 0.31
CHKAP35790 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.01■□□□□ 0.31
CHKAP35790 AC125807.1-201ENST00000483097 614 ntBASIC17.01■□□□□ 0.31
CHKAP35790 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.01■□□□□ 0.31
CHKAP35790 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.01■□□□□ 0.31
CHKAP35790 RARRES2P9-201ENST00000565168 469 ntBASIC17.01■□□□□ 0.31
CHKAP35790 AC140878.1-201ENST00000565277 250 ntBASIC17.01■□□□□ 0.31
CHKAP35790 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.01■□□□□ 0.31
CHKAP35790 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CHKAP35790 SPTSSB-204ENST00000617024 1292 ntBASIC17.01■□□□□ 0.31
CHKAP35790 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.01■□□□□ 0.31
CHKAP35790 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CHKAP35790 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CHKAP35790 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.01■□□□□ 0.31
CHKAP35790 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHKAP35790 AP005117.1-202ENST00000581724 1908 ntBASIC17.01■□□□□ 0.31
CHKAP35790 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.01■□□□□ 0.31
CHKAP35790 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.01■□□□□ 0.31
CHKAP35790 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHKAP35790 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CHKAP35790 PCGF3-213ENST00000620529 1899 ntBASIC17.01■□□□□ 0.31
CHKAP35790 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CHKAP35790 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CHKAP35790 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHKAP35790 AC023824.1-201ENST00000562945 2975 ntBASIC17.01■□□□□ 0.31
CHKAP35790 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.01■□□□□ 0.31
CHKAP35790 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.01■□□□□ 0.31
CHKAP35790 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHKAP35790 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHKAP35790 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CHKAP35790 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHKAP35790 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17■□□□□ 0.31
CHKAP35790 GPAA1P2-202ENST00000606848 1787 ntBASIC17■□□□□ 0.31
CHKAP35790 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17■□□□□ 0.31
CHKAP35790 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHKAP35790 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17■□□□□ 0.31
CHKAP35790 CASK-202ENST00000378158 3848 ntTSL 5 BASIC17■□□□□ 0.31
CHKAP35790 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
CHKAP35790 HLA-H-201ENST00000383620 1096 ntBASIC17■□□□□ 0.31
CHKAP35790 BAD-202ENST00000394531 631 ntTSL 3 BASIC17■□□□□ 0.31
CHKAP35790 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17■□□□□ 0.31
CHKAP35790 CDC14C-201ENST00000428251 1719 ntBASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms