Protein–RNA interactions for Protein: P30511

HLA-F, HLA class I histocompatibility antigen, alpha chain F, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-FP30511 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-FP30511 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.28■□□□□ 0.2
HLA-FP30511 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-FP30511 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
HLA-FP30511 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-FP30511 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
HLA-FP30511 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.28■□□□□ 0.2
HLA-FP30511 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-FP30511 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
HLA-FP30511 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.27■□□□□ 0.2
HLA-FP30511 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.27■□□□□ 0.2
HLA-FP30511 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.27■□□□□ 0.2
HLA-FP30511 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.27■□□□□ 0.2
HLA-FP30511 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-FP30511 AL139384.1-201ENST00000612143 3047 ntBASIC16.27■□□□□ 0.2
HLA-FP30511 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.27■□□□□ 0.2
HLA-FP30511 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-FP30511 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.27■□□□□ 0.2
HLA-FP30511 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
HLA-FP30511 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-FP30511 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
HLA-FP30511 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-FP30511 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-FP30511 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-FP30511 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-FP30511 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-FP30511 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-FP30511 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.27■□□□□ 0.2
HLA-FP30511 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
HLA-FP30511 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-FP30511 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.27■□□□□ 0.2
HLA-FP30511 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.27■□□□□ 0.2
HLA-FP30511 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.27■□□□□ 0.2
HLA-FP30511 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC16.27■□□□□ 0.2
HLA-FP30511 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
HLA-FP30511 RPL13P2-201ENST00000440687 659 ntBASIC16.27■□□□□ 0.2
HLA-FP30511 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.27■□□□□ 0.2
HLA-FP30511 MEIS3P1-201ENST00000495167 958 ntBASIC16.27■□□□□ 0.2
HLA-FP30511 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.27■□□□□ 0.2
HLA-FP30511 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-FP30511 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.27■□□□□ 0.2
HLA-FP30511 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
HLA-FP30511 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.27■□□□□ 0.2
HLA-FP30511 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.27■□□□□ 0.2
HLA-FP30511 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.27■□□□□ 0.2
HLA-FP30511 AC099568.2-201ENST00000609194 695 ntBASIC16.27■□□□□ 0.2
HLA-FP30511 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
HLA-FP30511 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-FP30511 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
HLA-FP30511 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.27■□□□□ 0.2
HLA-FP30511 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-FP30511 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.27■□□□□ 0.2
HLA-FP30511 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HLA-FP30511 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HLA-FP30511 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HLA-FP30511 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.27■□□□□ 0.19
HLA-FP30511 AL596087.1-201ENST00000400979 1969 ntBASIC16.27■□□□□ 0.19
HLA-FP30511 AC138969.3-201ENST00000546612 1459 ntBASIC16.27■□□□□ 0.19
HLA-FP30511 AC138932.2-201ENST00000548268 1459 ntBASIC16.27■□□□□ 0.19
HLA-FP30511 AC126755.4-201ENST00000549796 1459 ntBASIC16.27■□□□□ 0.19
HLA-FP30511 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HLA-FP30511 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.27■□□□□ 0.19
HLA-FP30511 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
HLA-FP30511 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.27■□□□□ 0.19
HLA-FP30511 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.27■□□□□ 0.19
HLA-FP30511 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HLA-FP30511 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.26■□□□□ 0.19
HLA-FP30511 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-FP30511 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-FP30511 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-FP30511 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-FP30511 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
HLA-FP30511 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-FP30511 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-FP30511 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-FP30511 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
HLA-FP30511 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-FP30511 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-FP30511 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-FP30511 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-FP30511 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-FP30511 MIR648-201ENST00000385046 94 ntBASIC16.26■□□□□ 0.19
HLA-FP30511 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-FP30511 PHKG1P2-201ENST00000457537 863 ntBASIC16.26■□□□□ 0.19
HLA-FP30511 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.26■□□□□ 0.19
HLA-FP30511 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.26■□□□□ 0.19
HLA-FP30511 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.26■□□□□ 0.19
HLA-FP30511 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-FP30511 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.26■□□□□ 0.19
HLA-FP30511 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-FP30511 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-FP30511 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-FP30511 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-FP30511 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-FP30511 CU639417.3-201ENST00000624240 1404 ntBASIC16.26■□□□□ 0.19
HLA-FP30511 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-FP30511 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.26■□□□□ 0.19
HLA-FP30511 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.26■□□□□ 0.19
HLA-FP30511 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-FP30511 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms