Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHC1P29353 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
SHC1P29353 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHC1P29353 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SHC1P29353 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHC1P29353 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.82□□□□□ -0.04
SHC1P29353 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHC1P29353 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.82□□□□□ -0.04
SHC1P29353 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.82□□□□□ -0.04
SHC1P29353 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.82□□□□□ -0.04
SHC1P29353 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.82□□□□□ -0.04
SHC1P29353 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.82□□□□□ -0.04
SHC1P29353 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.82□□□□□ -0.04
SHC1P29353 PRYP6-201ENST00000514804 343 ntBASIC14.82□□□□□ -0.04
SHC1P29353 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.82□□□□□ -0.04
SHC1P29353 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.82□□□□□ -0.04
SHC1P29353 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.82□□□□□ -0.04
SHC1P29353 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.82□□□□□ -0.04
SHC1P29353 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.82□□□□□ -0.04
SHC1P29353 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHC1P29353 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.82□□□□□ -0.04
SHC1P29353 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHC1P29353 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHC1P29353 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SHC1P29353 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHC1P29353 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.82□□□□□ -0.04
SHC1P29353 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHC1P29353 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHC1P29353 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHC1P29353 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHC1P29353 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
SHC1P29353 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHC1P29353 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHC1P29353 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SHC1P29353 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
SHC1P29353 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHC1P29353 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHC1P29353 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
SHC1P29353 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.82□□□□□ -0.04
SHC1P29353 FOXO1B-201ENST00000504678 1527 ntBASIC14.82□□□□□ -0.04
SHC1P29353 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
SHC1P29353 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SHC1P29353 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.81□□□□□ -0.04
SHC1P29353 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SHC1P29353 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SHC1P29353 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SHC1P29353 LINC01144-201ENST00000626198 1710 ntBASIC14.81□□□□□ -0.04
SHC1P29353 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SHC1P29353 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.81□□□□□ -0.04
SHC1P29353 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SHC1P29353 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SHC1P29353 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
SHC1P29353 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SHC1P29353 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
SHC1P29353 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.81□□□□□ -0.04
SHC1P29353 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.81□□□□□ -0.04
SHC1P29353 CNN2P11-201ENST00000429351 262 ntBASIC14.81□□□□□ -0.04
SHC1P29353 AC093724.1-201ENST00000448659 1027 ntBASIC14.81□□□□□ -0.04
SHC1P29353 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.81□□□□□ -0.04
SHC1P29353 AP000344.2-201ENST00000512987 629 ntBASIC14.81□□□□□ -0.04
SHC1P29353 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.81□□□□□ -0.04
SHC1P29353 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.81□□□□□ -0.04
SHC1P29353 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.81□□□□□ -0.04
SHC1P29353 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.81□□□□□ -0.04
SHC1P29353 AC027612.4-201ENST00000605371 583 ntBASIC14.81□□□□□ -0.04
SHC1P29353 GPALPP1-207ENST00000611650 899 ntBASIC14.81□□□□□ -0.04
SHC1P29353 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.81□□□□□ -0.04
SHC1P29353 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
SHC1P29353 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.81□□□□□ -0.04
SHC1P29353 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
SHC1P29353 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SHC1P29353 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SHC1P29353 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.81□□□□□ -0.04
SHC1P29353 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SHC1P29353 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
SHC1P29353 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.81□□□□□ -0.04
SHC1P29353 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SHC1P29353 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SHC1P29353 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.81□□□□□ -0.04
SHC1P29353 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.81□□□□□ -0.04
SHC1P29353 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SHC1P29353 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SHC1P29353 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SHC1P29353 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.81□□□□□ -0.04
SHC1P29353 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SHC1P29353 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.81□□□□□ -0.04
SHC1P29353 AP002414.2-201ENST00000591780 3365 ntBASIC14.81□□□□□ -0.04
SHC1P29353 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SHC1P29353 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
SHC1P29353 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
SHC1P29353 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHC1P29353 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHC1P29353 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHC1P29353 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHC1P29353 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.8□□□□□ -0.04
SHC1P29353 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
SHC1P29353 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.8□□□□□ -0.04
SHC1P29353 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHC1P29353 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHC1P29353 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms