Protein–RNA interactions for Protein: P25774

CTSS, Cathepsin S, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSSP25774 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTSSP25774 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CTSSP25774 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CTSSP25774 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CTSSP25774 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTSSP25774 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTSSP25774 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.38□□□□□ -0.11
CTSSP25774 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.38□□□□□ -0.11
CTSSP25774 AL139010.1-201ENST00000454878 894 ntBASIC14.38□□□□□ -0.11
CTSSP25774 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CTSSP25774 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CTSSP25774 ZNF890P-202ENST00000530367 1156 ntBASIC14.38□□□□□ -0.11
CTSSP25774 AC008738.7-201ENST00000609744 511 ntBASIC14.38□□□□□ -0.11
CTSSP25774 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.38□□□□□ -0.11
CTSSP25774 AL662799.1-202ENST00000614205 422 ntBASIC14.38□□□□□ -0.11
CTSSP25774 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
CTSSP25774 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTSSP25774 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTSSP25774 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.38□□□□□ -0.11
CTSSP25774 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.38□□□□□ -0.11
CTSSP25774 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC14.38□□□□□ -0.11
CTSSP25774 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.38□□□□□ -0.11
CTSSP25774 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTSSP25774 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTSSP25774 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.38□□□□□ -0.11
CTSSP25774 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTSSP25774 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTSSP25774 U82695.1-201ENST00000635752 1889 ntBASIC14.38□□□□□ -0.11
CTSSP25774 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTSSP25774 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTSSP25774 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CTSSP25774 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTSSP25774 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTSSP25774 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTSSP25774 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTSSP25774 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.37□□□□□ -0.11
CTSSP25774 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CTSSP25774 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CTSSP25774 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTSSP25774 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
CTSSP25774 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTSSP25774 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CTSSP25774 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CTSSP25774 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTSSP25774 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTSSP25774 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTSSP25774 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTSSP25774 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.37□□□□□ -0.11
CTSSP25774 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CTSSP25774 WBP2-203ENST00000433525 928 ntTSL 2 BASIC14.37□□□□□ -0.11
CTSSP25774 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.37□□□□□ -0.11
CTSSP25774 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.37□□□□□ -0.11
CTSSP25774 AC135586.1-201ENST00000539323 574 ntBASIC14.37□□□□□ -0.11
CTSSP25774 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.37□□□□□ -0.11
CTSSP25774 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.37□□□□□ -0.11
CTSSP25774 SPDYE22P-201ENST00000582158 798 ntBASIC14.37□□□□□ -0.11
CTSSP25774 AL365330.1-201ENST00000607459 531 ntBASIC14.37□□□□□ -0.11
CTSSP25774 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTSSP25774 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTSSP25774 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.37□□□□□ -0.11
CTSSP25774 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTSSP25774 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.37□□□□□ -0.11
CTSSP25774 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CTSSP25774 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTSSP25774 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTSSP25774 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.37□□□□□ -0.11
CTSSP25774 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTSSP25774 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.37□□□□□ -0.11
CTSSP25774 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTSSP25774 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CTSSP25774 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTSSP25774 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CTSSP25774 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTSSP25774 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTSSP25774 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTSSP25774 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTSSP25774 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTSSP25774 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.36□□□□□ -0.11
CTSSP25774 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.36□□□□□ -0.11
CTSSP25774 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CTSSP25774 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.36□□□□□ -0.11
CTSSP25774 KRT8P12-202ENST00000472924 1397 ntBASIC14.36□□□□□ -0.11
CTSSP25774 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
CTSSP25774 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTSSP25774 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
CTSSP25774 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTSSP25774 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
CTSSP25774 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CTSSP25774 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.36□□□□□ -0.11
CTSSP25774 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTSSP25774 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.36□□□□□ -0.11
CTSSP25774 MIR648-201ENST00000385046 94 ntBASIC14.36□□□□□ -0.11
CTSSP25774 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTSSP25774 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC14.36□□□□□ -0.11
CTSSP25774 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.36□□□□□ -0.11
CTSSP25774 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTSSP25774 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CTSSP25774 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CTSSP25774 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTSSP25774 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms