Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DPA1P20036 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DPA1P20036 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DPA1P20036 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.28■□□□□ 0.2
HLA-DPA1P20036 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.28■□□□□ 0.2
HLA-DPA1P20036 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DPA1P20036 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DPA1P20036 FAM58DP-201ENST00000428076 619 ntBASIC16.28■□□□□ 0.2
HLA-DPA1P20036 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.28■□□□□ 0.2
HLA-DPA1P20036 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.28■□□□□ 0.2
HLA-DPA1P20036 AC023141.5-201ENST00000458585 616 ntBASIC16.28■□□□□ 0.2
HLA-DPA1P20036 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.28■□□□□ 0.2
HLA-DPA1P20036 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DPA1P20036 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DPA1P20036 ALG1L8P-201ENST00000533887 760 ntBASIC16.28■□□□□ 0.2
HLA-DPA1P20036 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.28■□□□□ 0.2
HLA-DPA1P20036 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DPA1P20036 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.28■□□□□ 0.2
HLA-DPA1P20036 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.28■□□□□ 0.2
HLA-DPA1P20036 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.28■□□□□ 0.2
HLA-DPA1P20036 AC243562.2-201ENST00000561247 970 ntBASIC16.28■□□□□ 0.2
HLA-DPA1P20036 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.28■□□□□ 0.2
HLA-DPA1P20036 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.28■□□□□ 0.2
HLA-DPA1P20036 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.28■□□□□ 0.2
HLA-DPA1P20036 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.28■□□□□ 0.2
HLA-DPA1P20036 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.28■□□□□ 0.2
HLA-DPA1P20036 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DPA1P20036 AC079781.4-201ENST00000641908 219 ntBASIC16.28■□□□□ 0.2
HLA-DPA1P20036 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.28■□□□□ 0.2
HLA-DPA1P20036 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
HLA-DPA1P20036 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DPA1P20036 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DPA1P20036 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DPA1P20036 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
HLA-DPA1P20036 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DPA1P20036 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DPA1P20036 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
HLA-DPA1P20036 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DPA1P20036 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DPA1P20036 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DPA1P20036 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DPA1P20036 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DPA1P20036 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DPA1P20036 AC011477.6-201ENST00000604980 1927 ntBASIC16.27■□□□□ 0.2
HLA-DPA1P20036 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DPA1P20036 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.27■□□□□ 0.2
HLA-DPA1P20036 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.27■□□□□ 0.2
HLA-DPA1P20036 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DPA1P20036 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
HLA-DPA1P20036 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.27■□□□□ 0.2
HLA-DPA1P20036 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DPA1P20036 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.27■□□□□ 0.2
HLA-DPA1P20036 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DPA1P20036 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DPA1P20036 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
HLA-DPA1P20036 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DPA1P20036 CNN2P11-201ENST00000429351 262 ntBASIC16.27■□□□□ 0.2
HLA-DPA1P20036 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.27■□□□□ 0.2
HLA-DPA1P20036 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DPA1P20036 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.27■□□□□ 0.2
HLA-DPA1P20036 AC026979.3-201ENST00000607315 403 ntBASIC16.27■□□□□ 0.2
HLA-DPA1P20036 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
HLA-DPA1P20036 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HLA-DPA1P20036 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HLA-DPA1P20036 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HLA-DPA1P20036 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HLA-DPA1P20036 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
HLA-DPA1P20036 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
HLA-DPA1P20036 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.27■□□□□ 0.19
HLA-DPA1P20036 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.27■□□□□ 0.19
HLA-DPA1P20036 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.27■□□□□ 0.19
HLA-DPA1P20036 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
HLA-DPA1P20036 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HLA-DPA1P20036 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HLA-DPA1P20036 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
HLA-DPA1P20036 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.27■□□□□ 0.19
HLA-DPA1P20036 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.27■□□□□ 0.19
HLA-DPA1P20036 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HLA-DPA1P20036 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DPA1P20036 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DPA1P20036 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DPA1P20036 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
HLA-DPA1P20036 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DPA1P20036 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.26■□□□□ 0.19
HLA-DPA1P20036 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.26■□□□□ 0.19
HLA-DPA1P20036 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DPA1P20036 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DPA1P20036 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DPA1P20036 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.26■□□□□ 0.19
HLA-DPA1P20036 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DPA1P20036 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
HLA-DPA1P20036 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DPA1P20036 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.26■□□□□ 0.19
HLA-DPA1P20036 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
HLA-DPA1P20036 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DPA1P20036 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DPA1P20036 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DPA1P20036 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DPA1P20036 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.26■□□□□ 0.19
HLA-DPA1P20036 RPS8P6-201ENST00000426177 609 ntBASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms